RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ADAMTSL4-AS1Q5T5F5 129 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 LRP4O75096 1905 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 PRR9Q5T870 116 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 IGLV5-45A0A087WSX0 123 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 A0A096LNJ9 63 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 MOBPQ13875 183 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 Q9BRP9 147 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 PRR15Q8IV56 129 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 C6orf48Q9UBA6 75 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 MED12Q93074 2177 aa3.98□□□□□ -1.77
PTPRB-202ENST00000334414 ATP11AUNQ6ZP68 121 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 KLKP1Q107X0 134 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 ELOF1P60002 83 aaKnown RBP3.97□□□□□ -1.77
PTPRB-202ENST00000334414 ABCA7Q8IZY2 2146 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 LOC101927531A0A1B0GV80 90 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 MAPK1IP1LQ8NDC0 245 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 KIAA1549Q9HCM3 1950 aa3.97□□□□□ -1.77
PTPRB-202ENST00000334414 SMIM29Q86T20 159 aa3.96□□□□□ -1.77
PTPRB-202ENST00000334414 RAI1Q7Z5J4 1906 aaPredicted RBP3.96□□□□□ -1.78
PTPRB-202ENST00000334414 TRAV22A0A0B4J277 110 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 WIPF1O43516 503 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 C1orf229Q6ZS94 237 aaPredicted RBP3.96□□□□□ -1.78
PTPRB-202ENST00000334414 NUPR2A6NF83 97 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 LMO4P61968 165 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 LRCOL1A6NCL2 159 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 ZGRF1Q86YA3 2104 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 Q6ZQT0 140 aa3.96□□□□□ -1.78
PTPRB-202ENST00000334414 INTS1Q8N201 2190 aaKnown RBP3.95□□□□□ -1.78
PTPRB-202ENST00000334414 CEP192Q8TEP8 1941 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 C11orf71Q6IPW1 123 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 BBC3Q96PG8 261 aaPredicted RBP3.95□□□□□ -1.78
PTPRB-202ENST00000334414 LINC00337Q8N6G1 96 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 ALPK2Q86TB3 2170 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 Q6ZSV7 163 aa3.95□□□□□ -1.78
PTPRB-202ENST00000334414 ARHGAP32A7KAX9 2087 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 ADAMTS20P59510 1910 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 EXPH5Q8NEV8 1989 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 SPINK6Q6UWN8 80 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 RTTNQ86VV8 2226 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 COX6A2Q02221 97 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 DEFB4AO15263 64 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 DEFB1P60022 68 aa3.94□□□□□ -1.78
PTPRB-202ENST00000334414 GRNP28799 593 aaKnown RBP3.94□□□□□ -1.78
PTPRB-202ENST00000334414 DNAJC13O75165 2243 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 A0A087WSZ3 146 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 IGHV4-30-4P0DP06 118 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 IGHV4-31P0DP07 118 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 PROK1P58294 105 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 MSMPQ1L6U9 139 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 A0A096LNI7 61 aa3.93□□□□□ -1.78
PTPRB-202ENST00000334414 NCOA6Q14686 2063 aaPredicted RBP3.93□□□□□ -1.78
PTPRB-202ENST00000334414 SMCPP49901 116 aaPredicted RBP3.92□□□□□ -1.78
PTPRB-202ENST00000334414 SPATA3Q8NHX4 192 aa3.92□□□□□ -1.78
PTPRB-202ENST00000334414 PCDH15Q96QU1 1955 aa3.92□□□□□ -1.78
PTPRB-202ENST00000334414 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
PTPRB-202ENST00000334414 UNQ6190/PRO20217Q6UXQ8 127 aa3.92□□□□□ -1.78
PTPRB-202ENST00000334414 H3BNG1 76 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 PTPRSQ13332 1948 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 FHL2Q14192 279 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 UQCR11O14957 56 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 GAS8-AS1O95177 125 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 LCA10Q71F78 164 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
PTPRB-202ENST00000334414 TPRP12270 2363 aaKnown RBP3.91□□□□□ -1.78
PTPRB-202ENST00000334414 SHANK1Q9Y566 2161 aa3.9□□□□□ -1.78
PTPRB-202ENST00000334414 LY6G6DO95868 133 aa3.9□□□□□ -1.78
PTPRB-202ENST00000334414 Q6ZRX8 168 aa3.9□□□□□ -1.78
PTPRB-202ENST00000334414 SVILO95425 2214 aa3.9□□□□□ -1.78
PTPRB-202ENST00000334414 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.9□□□□□ -1.79
PTPRB-202ENST00000334414 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
PTPRB-202ENST00000334414 FAM19A4Q96LR4 140 aa3.9□□□□□ -1.79
PTPRB-202ENST00000334414 Q8NBF4 154 aa3.9□□□□□ -1.79
PTPRB-202ENST00000334414 DOCK7Q96N67 2140 aa3.9□□□□□ -1.79
PTPRB-202ENST00000334414 PTPRBP23467 1997 aa3.89□□□□□ -1.79
PTPRB-202ENST00000334414 IGLV4-60A0A075B6I1 120 aa3.89□□□□□ -1.79
PTPRB-202ENST00000334414 IGLV1-51P01701 117 aa3.89□□□□□ -1.79
PTPRB-202ENST00000334414 GVQW2A0A096LPI5 108 aaPredicted RBP3.89□□□□□ -1.79
PTPRB-202ENST00000334414 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 C9orf116Q5BN46 136 aaPredicted RBP3.88□□□□□ -1.79
PTPRB-202ENST00000334414 C16orf95Q9H693 158 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 FAM229AH3BQW9 127 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 A8MWP4 228 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 COA5Q86WW8 74 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 AHCTF1Q8WYP5 2266 aa3.88□□□□□ -1.79
PTPRB-202ENST00000334414 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
PTPRB-202ENST00000334414 ARFGEF3Q5TH69 2177 aa3.87□□□□□ -1.79
PTPRB-202ENST00000334414 DOCK10Q96BY6 2186 aa3.87□□□□□ -1.79
PTPRB-202ENST00000334414 KIF25-AS1Q9Y6Z4 181 aa3.87□□□□□ -1.79
PTPRB-202ENST00000334414 FAM186AA6NE01 2351 aa3.87□□□□□ -1.79
PTPRB-202ENST00000334414 ZNF407Q9C0G0 2248 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms