RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 SPINT4Q6UDR6 99 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 H0Y9P7 68 aa12.15□□□□□ -0.46
PTCH1-201ENST00000331920 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
PTCH1-201ENST00000331920 RBX1P62877 108 aa12.14□□□□□ -0.47
PTCH1-201ENST00000331920 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
PTCH1-201ENST00000331920 Q9UF83 564 aa12.14□□□□□ -0.47
PTCH1-201ENST00000331920 Q6ZSR3 168 aa12.14□□□□□ -0.47
PTCH1-201ENST00000331920 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
PTCH1-201ENST00000331920 M0QY20 66 aa12.13□□□□□ -0.47
PTCH1-201ENST00000331920 PTPRBP23467 1997 aa12.13□□□□□ -0.47
PTCH1-201ENST00000331920 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
PTCH1-201ENST00000331920 ALPK3Q96L96 1907 aa12.13□□□□□ -0.47
PTCH1-201ENST00000331920 IMUPQ9GZP8 106 aa12.12□□□□□ -0.47
PTCH1-201ENST00000331920 IGKV2D-30A0A075B6S6 120 aa12.12□□□□□ -0.47
PTCH1-201ENST00000331920 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
PTCH1-201ENST00000331920 C1orf137Q5JT78 98 aa12.12□□□□□ -0.47
PTCH1-201ENST00000331920 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
PTCH1-201ENST00000331920 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-201ENST00000331920 TRBV7-7A0A0K0K1E9 115 aa12.11□□□□□ -0.47
PTCH1-201ENST00000331920 SPAG11AQ6PDA7 123 aa12.11□□□□□ -0.47
PTCH1-201ENST00000331920 LRRC75A-AS1Q8N1F1 130 aa12.11□□□□□ -0.47
PTCH1-201ENST00000331920 LINC00959A0A1B0GUT2 108 aa12.1□□□□□ -0.47
PTCH1-201ENST00000331920 TNFRSF13BO14836 293 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-201ENST00000331920 PIP4P1Q86T03 277 aa12.1□□□□□ -0.47
PTCH1-201ENST00000331920 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
PTCH1-201ENST00000331920 Q6YL49 198 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 COX17Q14061 63 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 FSHBP01225 129 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
PTCH1-201ENST00000331920 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
PTCH1-201ENST00000331920 LELP1Q5T871 98 aa12.08□□□□□ -0.48
PTCH1-201ENST00000331920 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
PTCH1-201ENST00000331920 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.48
PTCH1-201ENST00000331920 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-201ENST00000331920 K7EQG2 157 aa12.07□□□□□ -0.48
PTCH1-201ENST00000331920 IGLV1-47P01700 117 aa12.07□□□□□ -0.48
PTCH1-201ENST00000331920 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
PTCH1-201ENST00000331920 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
PTCH1-201ENST00000331920 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
PTCH1-201ENST00000331920 CYSRT1A8MQ03 144 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 A0A087WVE0 104 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 LINC00337Q8N6G1 96 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 Q9BRP9 147 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 Q6ZS46 218 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
PTCH1-201ENST00000331920 IGLV8-61A0A075B6I0 122 aa12.05□□□□□ -0.48
PTCH1-201ENST00000331920 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
PTCH1-201ENST00000331920 LINC00575Q6W349 94 aa12.04□□□□□ -0.48
PTCH1-201ENST00000331920 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
PTCH1-201ENST00000331920 HCG22E2RYF7 251 aa12.04□□□□□ -0.48
PTCH1-201ENST00000331920 TSHBP01222 138 aa12.04□□□□□ -0.48
PTCH1-201ENST00000331920 XGP55808 180 aa12.04□□□□□ -0.48
PTCH1-201ENST00000331920 LY6G6DO95868 133 aa12.03□□□□□ -0.48
PTCH1-201ENST00000331920 GPR179Q6PRD1 2367 aa12.03□□□□□ -0.48
PTCH1-201ENST00000331920 Q6JHZ5 121 aa12.02□□□□□ -0.48
PTCH1-201ENST00000331920 RNF185Q96GF1 192 aa12.02□□□□□ -0.48
PTCH1-201ENST00000331920 CRIP1P50238 77 aa12.02□□□□□ -0.49
PTCH1-201ENST00000331920 A0A1B0GU69 56 aa12.02□□□□□ -0.49
PTCH1-201ENST00000331920 Q8N814 137 aa12.01□□□□□ -0.49
PTCH1-201ENST00000331920 VPREB1P12018 145 aa12.01□□□□□ -0.49
PTCH1-201ENST00000331920 A0A087WYN8 130 aa12.01□□□□□ -0.49
PTCH1-201ENST00000331920 C2orf48Q96LS8 159 aa12.01□□□□□ -0.49
PTCH1-201ENST00000331920 TRBV10-3A0A0K0K1G6 114 aa12□□□□□ -0.49
PTCH1-201ENST00000331920 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
PTCH1-201ENST00000331920 KRTAP27-1Q3LI81 207 aa12□□□□□ -0.49
PTCH1-201ENST00000331920 CCDC168Q8NDH2 2452 aa11.99□□□□□ -0.49
PTCH1-201ENST00000331920 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
PTCH1-201ENST00000331920 Q8N3U1 123 aa11.99□□□□□ -0.49
PTCH1-201ENST00000331920 HIVEP3Q5T1R4 2406 aa11.98□□□□□ -0.49
PTCH1-201ENST00000331920 Q6ZSV7 163 aa11.98□□□□□ -0.49
PTCH1-201ENST00000331920 ODF3BA8MYP8 253 aa11.98□□□□□ -0.49
PTCH1-201ENST00000331920 hDV103S1A0JD37 113 aa11.98□□□□□ -0.49
PTCH1-201ENST00000331920 A0A087WSZ3 146 aa11.97□□□□□ -0.49
PTCH1-201ENST00000331920 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
PTCH1-201ENST00000331920 IGFL2Q6UWQ7 119 aa11.95□□□□□ -0.5
PTCH1-201ENST00000331920 Q8IZM0 81 aa11.95□□□□□ -0.5
PTCH1-201ENST00000331920 NRACQ8N912 160 aa11.95□□□□□ -0.5
PTCH1-201ENST00000331920 BRI3O95415 125 aa11.94□□□□□ -0.5
PTCH1-201ENST00000331920 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-201ENST00000331920 COX6A2Q02221 97 aa11.93□□□□□ -0.5
PTCH1-201ENST00000331920 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
PTCH1-201ENST00000331920 U3KQK5 164 aa11.92□□□□□ -0.5
PTCH1-201ENST00000331920 ADAMTS20P59510 1910 aa11.92□□□□□ -0.5
PTCH1-201ENST00000331920 LMO4P61968 165 aa11.92□□□□□ -0.5
PTCH1-201ENST00000331920 MUC6Q6W4X9 2439 aa11.92□□□□□ -0.5
PTCH1-201ENST00000331920 A8MTW9 85 aa11.92□□□□□ -0.5
PTCH1-201ENST00000331920 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
PTCH1-201ENST00000331920 C2orf91Q6ZV80 131 aa11.91□□□□□ -0.5
PTCH1-201ENST00000331920 ACYP2P14621 99 aa11.91□□□□□ -0.5
PTCH1-201ENST00000331920 MRGPRG-AS1Q2M3A8 158 aa11.9□□□□□ -0.5
PTCH1-201ENST00000331920 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
PTCH1-201ENST00000331920 WISP2O76076 250 aa11.89□□□□□ -0.51
PTCH1-201ENST00000331920 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
PTCH1-201ENST00000331920 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
PTCH1-201ENST00000331920 SSBP3-AS1Q7Z2R9 100 aa11.89□□□□□ -0.51
PTCH1-201ENST00000331920 PRR9Q5T870 116 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms