RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 UBE2D1P51668 147 aa11.35□□□□□ -0.59
PDGFB-201ENST00000331163 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
PDGFB-201ENST00000331163 TEX49A0A1B0GTD5 131 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 COX8CQ7Z4L0 72 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 J3QQQ9 107 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 ATP5G1P05496 136 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 C11orf72Q8NBR9 251 aa11.34□□□□□ -0.59
PDGFB-201ENST00000331163 SBSPONQ8IVN8 264 aa11.33□□□□□ -0.6
PDGFB-201ENST00000331163 ATP6V0E2Q8NHE4 81 aa11.33□□□□□ -0.6
PDGFB-201ENST00000331163 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 WFDC9Q8NEX5 89 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 IGHV3-30P01768 117 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 IGHV3-30-5P0DP03 117 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 UBE2D3P61077 147 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 UBE2D2P62837 147 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 PMVKQ15126 192 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 MUSTN1Q8IVN3 82 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 TMEM101Q96IK0 257 aa11.32□□□□□ -0.6
PDGFB-201ENST00000331163 RHOHQ15669 191 aa11.31□□□□□ -0.6
PDGFB-201ENST00000331163 Q6ZTC4 211 aa11.31□□□□□ -0.6
PDGFB-201ENST00000331163 C15orf53Q8NAA6 179 aa11.31□□□□□ -0.6
PDGFB-201ENST00000331163 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
PDGFB-201ENST00000331163 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
PDGFB-201ENST00000331163 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
PDGFB-201ENST00000331163 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
PDGFB-201ENST00000331163 Q9HAA7 133 aa11.3□□□□□ -0.6
PDGFB-201ENST00000331163 A0A0J9YXV3 536 aa11.3□□□□□ -0.6
PDGFB-201ENST00000331163 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
PDGFB-201ENST00000331163 VSIG2Q96IQ7 327 aa11.29□□□□□ -0.6
PDGFB-201ENST00000331163 TSHBP01222 138 aa11.29□□□□□ -0.6
PDGFB-201ENST00000331163 TENM2Q9NT68 2774 aa11.29□□□□□ -0.6
PDGFB-201ENST00000331163 IGLV4-69A0A075B6H9 119 aa11.29□□□□□ -0.6
PDGFB-201ENST00000331163 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
PDGFB-201ENST00000331163 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
PDGFB-201ENST00000331163 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
PDGFB-201ENST00000331163 IFITM1P13164 125 aa11.28□□□□□ -0.6
PDGFB-201ENST00000331163 X6R8D5 127 aa11.28□□□□□ -0.6
PDGFB-201ENST00000331163 XCL1P47992 114 aa11.28□□□□□ -0.6
PDGFB-201ENST00000331163 LINC00315P59091 139 aa11.27□□□□□ -0.61
PDGFB-201ENST00000331163 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
PDGFB-201ENST00000331163 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.61
PDGFB-201ENST00000331163 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 DAND5Q8N907 189 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 CLEC2BQ92478 149 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 A8MZ25 164 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
PDGFB-201ENST00000331163 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
PDGFB-201ENST00000331163 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
PDGFB-201ENST00000331163 RS1O15537 224 aa11.25□□□□□ -0.61
PDGFB-201ENST00000331163 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
PDGFB-201ENST00000331163 LINC00694P0DN24 101 aa11.24□□□□□ -0.61
PDGFB-201ENST00000331163 ATXN8Q156A1 80 aa11.24□□□□□ -0.61
PDGFB-201ENST00000331163 NHLRC4P0CG21 123 aaPredicted RBP11.24□□□□□ -0.61
PDGFB-201ENST00000331163 CSNK1G2-AS1Q8NCQ2 148 aa11.24□□□□□ -0.61
PDGFB-201ENST00000331163 MIFP14174 115 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 KIR2DL5BQ8NHK3 375 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 UBE2WQ96B02 151 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 UBE2DNLQ8IWF7 75 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 Q8N3U1 123 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
PDGFB-201ENST00000331163 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
PDGFB-201ENST00000331163 DAZ2Q13117 558 aaKnown RBP11.22□□□□□ -0.61
PDGFB-201ENST00000331163 K7EIL1 84 aa11.22□□□□□ -0.61
PDGFB-201ENST00000331163 TRIAP1O43715 76 aa11.22□□□□□ -0.61
PDGFB-201ENST00000331163 FHL2Q14192 279 aa11.22□□□□□ -0.61
PDGFB-201ENST00000331163 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
PDGFB-201ENST00000331163 TMEM141Q96I45 108 aa11.21□□□□□ -0.62
PDGFB-201ENST00000331163 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
PDGFB-201ENST00000331163 LINC00526Q96FQ7 95 aa11.19□□□□□ -0.62
PDGFB-201ENST00000331163 SMIM9A6NGZ8 99 aa11.19□□□□□ -0.62
PDGFB-201ENST00000331163 COX6CP09669 75 aa11.19□□□□□ -0.62
PDGFB-201ENST00000331163 MRPL23Q16540 153 aaKnown RBP11.19□□□□□ -0.62
PDGFB-201ENST00000331163 KPRPQ5T749 579 aaPredicted RBP11.19□□□□□ -0.62
PDGFB-201ENST00000331163 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
PDGFB-201ENST00000331163 CRPP02741 224 aa11.18□□□□□ -0.62
PDGFB-201ENST00000331163 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
PDGFB-201ENST00000331163 MALP21145 153 aa11.18□□□□□ -0.62
PDGFB-201ENST00000331163 TIMM21Q9BVV7 248 aa11.18□□□□□ -0.62
PDGFB-201ENST00000331163 ICOSQ9Y6W8 199 aa11.18□□□□□ -0.62
PDGFB-201ENST00000331163 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
PDGFB-201ENST00000331163 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
PDGFB-201ENST00000331163 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
PDGFB-201ENST00000331163 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
PDGFB-201ENST00000331163 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
PDGFB-201ENST00000331163 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
PDGFB-201ENST00000331163 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
PDGFB-201ENST00000331163 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
PDGFB-201ENST00000331163 NXPH4O95158 308 aa11.16□□□□□ -0.62
PDGFB-201ENST00000331163 Q8NAQ8 132 aa11.16□□□□□ -0.62
PDGFB-201ENST00000331163 LEPROTO15243 131 aa11.15□□□□□ -0.62
PDGFB-201ENST00000331163 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
PDGFB-201ENST00000331163 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
PDGFB-201ENST00000331163 IGLV4-3A0A075B6K6 122 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms