RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 EPG5Q9HCE0 2579 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 C9orf85Q96MD7 179 aa13.86□□□□□ -0.19
NPLOC4-201ENST00000331134 A0A087WVE0 104 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 A0A0U1RQV1 116 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 SMIM11BQ8TCY0 68 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 SNURFQ9Y675 71 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 ADAMTS20P59510 1910 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 CHCHD10Q8WYQ3 142 aaPredicted RBP13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 CXCL5P42830 114 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 PKIGQ9Y2B9 76 aa13.85□□□□□ -0.19
NPLOC4-201ENST00000331134 IBA57-AS1B1ANH7 110 aa13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 REG3AQ06141 175 aa13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 FAM222AQ5U5X8 452 aa13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 LINC00694P0DN24 101 aa13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 COX7BP24311 80 aa13.84□□□□□ -0.19
NPLOC4-201ENST00000331134 FAM236DA0A1B0GTK5 79 aa13.83□□□□□ -0.19
NPLOC4-201ENST00000331134 FAM236CP0DP71 79 aa13.83□□□□□ -0.19
NPLOC4-201ENST00000331134 MRGPRG-AS1Q2M3A8 158 aa13.83□□□□□ -0.19
NPLOC4-201ENST00000331134 TRBV6-8A0A0A6YYG3 113 aa13.83□□□□□ -0.2
NPLOC4-201ENST00000331134 PSMG3-AS1Q96PY0 264 aa13.83□□□□□ -0.2
NPLOC4-201ENST00000331134 SERP2Q8N6R1 65 aa13.82□□□□□ -0.2
NPLOC4-201ENST00000331134 BPY2O14599 106 aa13.82□□□□□ -0.2
NPLOC4-201ENST00000331134 COX7CP15954 63 aa13.82□□□□□ -0.2
NPLOC4-201ENST00000331134 CDIP1Q9H305 208 aa13.82□□□□□ -0.2
NPLOC4-201ENST00000331134 KLK5Q9Y337 293 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-201ENST00000331134 SPEGQ15772 3267 aa13.81□□□□□ -0.2
NPLOC4-201ENST00000331134 CENPEQ02224 2701 aa13.81□□□□□ -0.2
NPLOC4-201ENST00000331134 LINC00242Q5T6M2 205 aa13.81□□□□□ -0.2
NPLOC4-201ENST00000331134 Q6ZQY7 126 aa13.8□□□□□ -0.2
NPLOC4-201ENST00000331134 DNAJC9-AS1A6NH13 148 aa13.79□□□□□ -0.2
NPLOC4-201ENST00000331134 TIMM17BO60830 172 aa13.79□□□□□ -0.2
NPLOC4-201ENST00000331134 IMUPQ9GZP8 106 aa13.79□□□□□ -0.2
NPLOC4-201ENST00000331134 TRANK1O15050 2925 aa13.79□□□□□ -0.2
NPLOC4-201ENST00000331134 AVPP01185 164 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 CCL18P55774 89 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 M0QXV9 152 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 LINC00482Q8N8I6 264 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 A0A096LNI7 61 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 MP68P56378 58 aa13.78□□□□□ -0.2
NPLOC4-201ENST00000331134 C9orf66Q5T8R8 295 aa13.77□□□□□ -0.21
NPLOC4-201ENST00000331134 USP34Q70CQ2 3546 aa13.76□□□□□ -0.21
NPLOC4-201ENST00000331134 COX6A2Q02221 97 aa13.76□□□□□ -0.21
NPLOC4-201ENST00000331134 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
NPLOC4-201ENST00000331134 COX8CQ7Z4L0 72 aa13.76□□□□□ -0.21
NPLOC4-201ENST00000331134 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-201ENST00000331134 SMCPP49901 116 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 ANKRD17O75179 2603 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 A0A1W2PPR1 153 aa13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 PDE6GP18545 87 aa13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 NDUFC2O95298 119 aa13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 PRR3P79522 188 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-201ENST00000331134 Q6YL49 198 aa13.74□□□□□ -0.21
NPLOC4-201ENST00000331134 PRR4Q16378 134 aa13.74□□□□□ -0.21
NPLOC4-201ENST00000331134 RMI2Q96E14 147 aa13.74□□□□□ -0.21
NPLOC4-201ENST00000331134 C1orf158Q8N1D5 194 aa13.74□□□□□ -0.21
NPLOC4-201ENST00000331134 CCKP06307 115 aa13.73□□□□□ -0.21
NPLOC4-201ENST00000331134 IGLV1-40P01703 118 aa13.73□□□□□ -0.21
NPLOC4-201ENST00000331134 SMIM1B2RUZ4 78 aa13.73□□□□□ -0.21
NPLOC4-201ENST00000331134 CDC42SE2Q9NRR3 84 aa13.73□□□□□ -0.21
NPLOC4-201ENST00000331134 IGKV2-24A0A0C4DH68 120 aa13.72□□□□□ -0.21
NPLOC4-201ENST00000331134 HIGD2AQ9BW72 106 aa13.72□□□□□ -0.21
NPLOC4-201ENST00000331134 Q6Q795 121 aa13.72□□□□□ -0.21
NPLOC4-201ENST00000331134 HRCT1Q6UXD1 115 aa13.72□□□□□ -0.21
NPLOC4-201ENST00000331134 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.21
NPLOC4-201ENST00000331134 FREM2Q5SZK8 3169 aa13.71□□□□□ -0.22
NPLOC4-201ENST00000331134 PRO3102Q9H379 93 aa13.71□□□□□ -0.22
NPLOC4-201ENST00000331134 LAMA1P25391 3075 aa13.71□□□□□ -0.22
NPLOC4-201ENST00000331134 RAI1Q7Z5J4 1906 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-201ENST00000331134 LINC00959A0A1B0GUT2 108 aa13.7□□□□□ -0.22
NPLOC4-201ENST00000331134 Q6ZSN1 163 aa13.69□□□□□ -0.22
NPLOC4-201ENST00000331134 FAM240AA0A1B0GVK7 77 aa13.69□□□□□ -0.22
NPLOC4-201ENST00000331134 IGHV4-31P0DP07 118 aa13.69□□□□□ -0.22
NPLOC4-201ENST00000331134 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 C9orf116Q5BN46 136 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 ATP5EP2Q5VTU8 51 aa13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 LRRC75A-AS1Q8N1F1 130 aa13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 ZNF702PQ9H963 129 aa13.68□□□□□ -0.22
NPLOC4-201ENST00000331134 A0A087WYN8 130 aa13.67□□□□□ -0.22
NPLOC4-201ENST00000331134 SPTSSBQ8NFR3 76 aa13.67□□□□□ -0.22
NPLOC4-201ENST00000331134 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
NPLOC4-201ENST00000331134 IGKV2-28A0A075B6P5 120 aa13.67□□□□□ -0.22
NPLOC4-201ENST00000331134 IGKV2D-28P01615 120 aa13.67□□□□□ -0.22
NPLOC4-201ENST00000331134 COL5A1P20908 1838 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-201ENST00000331134 J3QKU1 62 aa13.66□□□□□ -0.22
NPLOC4-201ENST00000331134 FLNBO75369 2602 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-201ENST00000331134 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
NPLOC4-201ENST00000331134 H0Y9J4 135 aa13.65□□□□□ -0.22
NPLOC4-201ENST00000331134 MYO15AQ9UKN7 3530 aa13.65□□□□□ -0.22
NPLOC4-201ENST00000331134 IGLV4-60A0A075B6I1 120 aa13.65□□□□□ -0.22
NPLOC4-201ENST00000331134 ODF3L2Q3SX64 289 aa13.65□□□□□ -0.22
NPLOC4-201ENST00000331134 H3BQ85 93 aa13.64□□□□□ -0.23
NPLOC4-201ENST00000331134 REV3LO60673 3130 aa13.64□□□□□ -0.23
NPLOC4-201ENST00000331134 AMELXQ99217 191 aa13.64□□□□□ -0.23
NPLOC4-201ENST00000331134 MAP1AP78559 2803 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-201ENST00000331134 ATRQ13535 2644 aa13.63□□□□□ -0.23
NPLOC4-201ENST00000331134 NDUFB1O75438 58 aa13.63□□□□□ -0.23
NPLOC4-201ENST00000331134 AKAP13Q12802 2813 aa13.62□□□□□ -0.23
NPLOC4-201ENST00000331134 KIF25-AS1Q9Y6Z4 181 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms