RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ENHOQ6UWT2 76 aa14.81□□□□□ -0.04
CMTM4-201ENST00000330687 LMO4P61968 165 aa14.81□□□□□ -0.04
CMTM4-201ENST00000330687 RPS28P62857 69 aaKnown RBP14.8□□□□□ -0.04
CMTM4-201ENST00000330687 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
CMTM4-201ENST00000330687 PKIGQ9Y2B9 76 aa14.8□□□□□ -0.04
CMTM4-201ENST00000330687 DEFB136Q30KP8 78 aa14.79□□□□□ -0.04
CMTM4-201ENST00000330687 C11orf71Q6IPW1 123 aa14.79□□□□□ -0.04
CMTM4-201ENST00000330687 XCL2Q9UBD3 114 aa14.79□□□□□ -0.04
CMTM4-201ENST00000330687 K7EQG2 157 aa14.78□□□□□ -0.04
CMTM4-201ENST00000330687 UBE2L6O14933 153 aa14.78□□□□□ -0.04
CMTM4-201ENST00000330687 RBMY1BA6NDE4 496 aaKnown RBP14.78□□□□□ -0.04
CMTM4-201ENST00000330687 RBMY1EA6NEQ0 496 aaKnown RBP14.78□□□□□ -0.04
CMTM4-201ENST00000330687 RBMY1DP0C7P1 496 aaKnown RBP14.78□□□□□ -0.04
CMTM4-201ENST00000330687 VPS13CQ709C8 3753 aa14.78□□□□□ -0.04
CMTM4-201ENST00000330687 ZNF415Q09FC8 603 aa14.78□□□□□ -0.04
CMTM4-201ENST00000330687 MYO18BQ8IUG5 2567 aa14.77□□□□□ -0.05
CMTM4-201ENST00000330687 ABCA2Q9BZC7 2435 aa14.77□□□□□ -0.05
CMTM4-201ENST00000330687 FAM222AQ5U5X8 452 aa14.76□□□□□ -0.05
CMTM4-201ENST00000330687 RPL28P46779 137 aaKnown RBP14.76□□□□□ -0.05
CMTM4-201ENST00000330687 Q6JHZ5 121 aa14.75□□□□□ -0.05
CMTM4-201ENST00000330687 WFDC11Q8NEX6 87 aa14.75□□□□□ -0.05
CMTM4-201ENST00000330687 Q96MF0 132 aa14.74□□□□□ -0.05
CMTM4-201ENST00000330687 SNURFQ9Y675 71 aa14.73□□□□□ -0.05
CMTM4-201ENST00000330687 IGKV2-28A0A075B6P5 120 aa14.73□□□□□ -0.05
CMTM4-201ENST00000330687 IGLV5-39A0A0G2JS06 123 aa14.73□□□□□ -0.05
CMTM4-201ENST00000330687 IGKV2D-28P01615 120 aa14.73□□□□□ -0.05
CMTM4-201ENST00000330687 KLK9Q2XQG4 91 aa14.73□□□□□ -0.05
CMTM4-201ENST00000330687 ADORA2A-AS1P86434 159 aa14.72□□□□□ -0.05
CMTM4-201ENST00000330687 Q5XG85 94 aa14.72□□□□□ -0.05
CMTM4-201ENST00000330687 UPK3BQ9BT76 320 aa14.72□□□□□ -0.05
CMTM4-201ENST00000330687 ITPR1Q14643 2758 aa14.71□□□□□ -0.05
CMTM4-201ENST00000330687 ZANQ9Y493 2812 aa14.7□□□□□ -0.06
CMTM4-201ENST00000330687 CCL18P55774 89 aa14.7□□□□□ -0.06
CMTM4-201ENST00000330687 HAMPP81172 84 aa14.7□□□□□ -0.06
CMTM4-201ENST00000330687 K7EMT4 169 aa14.7□□□□□ -0.06
CMTM4-201ENST00000330687 PRR3P79522 188 aaKnown RBP14.7□□□□□ -0.06
CMTM4-201ENST00000330687 ORMDL1Q9P0S3 153 aa14.69□□□□□ -0.06
CMTM4-201ENST00000330687 IGHV4-61A0A0C4DH41 118 aa14.69□□□□□ -0.06
CMTM4-201ENST00000330687 COX7B2Q8TF08 81 aa14.69□□□□□ -0.06
CMTM4-201ENST00000330687 FAM236DA0A1B0GTK5 79 aa14.68□□□□□ -0.06
CMTM4-201ENST00000330687 FAM236CP0DP71 79 aa14.68□□□□□ -0.06
CMTM4-201ENST00000330687 IGLV5-45A0A087WSX0 123 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 IGHV4-59P01825 116 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 CELSR2Q9HCU4 2923 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 A0A0U1RQV1 116 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 SLURP1P55000 103 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 NAV2Q8IVL1 2488 aa14.67□□□□□ -0.06
CMTM4-201ENST00000330687 EPG5Q9HCE0 2579 aa14.66□□□□□ -0.06
CMTM4-201ENST00000330687 Q6ZTI0 123 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 LINC00336Q6ZUF6 198 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 NOTCH2Q04721 2471 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 H0YGX0 51 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 IGLV1-40P01703 118 aa14.65□□□□□ -0.06
CMTM4-201ENST00000330687 CLPSL2Q6UWE3 100 aa14.64□□□□□ -0.07
CMTM4-201ENST00000330687 CHD6Q8TD26 2715 aa14.64□□□□□ -0.07
CMTM4-201ENST00000330687 NTM-AS1Q6ZSK4 140 aa14.64□□□□□ -0.07
CMTM4-201ENST00000330687 H3BUA1 57 aa14.64□□□□□ -0.07
CMTM4-201ENST00000330687 C6orf226Q5I0X4 101 aa14.64□□□□□ -0.07
CMTM4-201ENST00000330687 A6NDX4 124 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 UBL5Q9BZL1 73 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 LOC100131303A0A0U1RQF7 123 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 PSMB8P28062 276 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 XCL1P47992 114 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 C18orf65Q6ZTR6 163 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 PRORYQ9H606 182 aa14.63□□□□□ -0.07
CMTM4-201ENST00000330687 CCDC168Q8NDH2 2452 aa14.62□□□□□ -0.07
CMTM4-201ENST00000330687 NBL1P41271 181 aa14.62□□□□□ -0.07
CMTM4-201ENST00000330687 DYNLRB2Q8TF09 96 aa14.62□□□□□ -0.07
CMTM4-201ENST00000330687 CDC42SE2Q9NRR3 84 aa14.62□□□□□ -0.07
CMTM4-201ENST00000330687 PF4P02776 101 aa14.62□□□□□ -0.07
CMTM4-201ENST00000330687 RPL35AP18077 110 aaKnown RBP14.62□□□□□ -0.07
CMTM4-201ENST00000330687 MAPK1IP1LQ8NDC0 245 aa14.61□□□□□ -0.07
CMTM4-201ENST00000330687 WIPF1O43516 503 aa14.61□□□□□ -0.07
CMTM4-201ENST00000330687 RBM3P98179 157 aaKnown RBP14.6□□□□□ -0.07
CMTM4-201ENST00000330687 SCXQ7RTU7 201 aa14.6□□□□□ -0.07
CMTM4-201ENST00000330687 TRGV2A0A075B6R0 118 aa14.59□□□□□ -0.07
CMTM4-201ENST00000330687 C11orf44Q8N8P7 122 aa14.59□□□□□ -0.07
CMTM4-201ENST00000330687 LAMTOR3Q9UHA4 124 aa14.59□□□□□ -0.07
CMTM4-201ENST00000330687 CCKP06307 115 aa14.59□□□□□ -0.07
CMTM4-201ENST00000330687 RMI2Q96E14 147 aa14.59□□□□□ -0.07
CMTM4-201ENST00000330687 NBEAL2Q6ZNJ1 2754 aa14.58□□□□□ -0.07
CMTM4-201ENST00000330687 LRRK2Q5S007 2527 aa14.58□□□□□ -0.07
CMTM4-201ENST00000330687 C19orf84I3L1E1 186 aa14.58□□□□□ -0.08
CMTM4-201ENST00000330687 INSP01308 110 aa14.57□□□□□ -0.08
CMTM4-201ENST00000330687 FBXL19-AS1Q494R0 122 aa14.57□□□□□ -0.08
CMTM4-201ENST00000330687 BRK1Q8WUW1 75 aa14.57□□□□□ -0.08
CMTM4-201ENST00000330687 AVPP01185 164 aa14.57□□□□□ -0.08
CMTM4-201ENST00000330687 NOP10Q9NPE3 64 aaKnown RBP14.57□□□□□ -0.08
CMTM4-201ENST00000330687 FBN2P35556 2912 aa14.56□□□□□ -0.08
CMTM4-201ENST00000330687 NDUFC2O95298 119 aa14.56□□□□□ -0.08
CMTM4-201ENST00000330687 S100A7L2Q5SY68 101 aa14.56□□□□□ -0.08
CMTM4-201ENST00000330687 C11orf72Q8NBR9 251 aa14.56□□□□□ -0.08
CMTM4-201ENST00000330687 ABCA12Q86UK0 2595 aa14.55□□□□□ -0.08
CMTM4-201ENST00000330687 A8MTW9 85 aa14.55□□□□□ -0.08
CMTM4-201ENST00000330687 J3QLI3 93 aa14.55□□□□□ -0.08
CMTM4-201ENST00000330687 K7EQD1 137 aa14.55□□□□□ -0.08
CMTM4-201ENST00000330687 DEFB112Q30KQ8 113 aa14.54□□□□□ -0.08
CMTM4-201ENST00000330687 IGLV4-60A0A075B6I1 120 aa14.53□□□□□ -0.08
CMTM4-201ENST00000330687 F8WEM9 126 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms