RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CELSR1Q9NYQ6 3014 aa8.06□□□□□ -1.12
GINS3-202ENST00000328514 MSMBP08118 114 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
GINS3-202ENST00000328514 Q6JHZ5 121 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 F8P00451 2351 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 CENPEQ02224 2701 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 DEFB131AP59861 70 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
GINS3-202ENST00000328514 C10orf99Q6UWK7 81 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
GINS3-202ENST00000328514 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
GINS3-202ENST00000328514 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
GINS3-202ENST00000328514 H0YGX0 51 aa8.04□□□□□ -1.12
GINS3-202ENST00000328514 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
GINS3-202ENST00000328514 CRPP02741 224 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 PRM2P04554 102 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 DNAL4O96015 105 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 C5orf47Q569G3 176 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 IL17DQ8TAD2 202 aa8.03□□□□□ -1.12
GINS3-202ENST00000328514 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
GINS3-202ENST00000328514 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
GINS3-202ENST00000328514 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
GINS3-202ENST00000328514 Q9HAA7 133 aa8.02□□□□□ -1.13
GINS3-202ENST00000328514 CELSR2Q9HCU4 2923 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 TRAV13-1A0A0B4J241 112 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 AVPP01185 164 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 INSP01308 110 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 IGHV4-59P01825 116 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 TMEM258P61165 79 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 NTM-AS1Q6ZSK4 140 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 SERP2Q8N6R1 65 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 Q96MF0 132 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
GINS3-202ENST00000328514 UPK3BQ9BT76 320 aa8.01□□□□□ -1.13
GINS3-202ENST00000328514 B4DSR2 109 aa8□□□□□ -1.13
GINS3-202ENST00000328514 C19orf84I3L1E1 186 aa8□□□□□ -1.13
GINS3-202ENST00000328514 RPL36AP83881 106 aaKnown RBP8□□□□□ -1.13
GINS3-202ENST00000328514 RPL36ALQ969Q0 106 aaKnown RBP8□□□□□ -1.13
GINS3-202ENST00000328514 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
GINS3-202ENST00000328514 CRYBG3Q68DQ2 2970 aa8□□□□□ -1.13
GINS3-202ENST00000328514 A0A087WYN8 130 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 SMIM9A6NGZ8 99 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 SMIM11BQ8TCY0 68 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 MAP6D1Q9H9H5 199 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■■□□□ 13.9
GINS3-202ENST00000328514 IGHV4-30-2A0A087WSY4 118 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 K7EQD1 137 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 DEFB112Q30KQ8 113 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
GINS3-202ENST00000328514 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
GINS3-202ENST00000328514 COX7B2Q8TF08 81 aa7.98□□□□□ -1.13
GINS3-202ENST00000328514 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
GINS3-202ENST00000328514 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
GINS3-202ENST00000328514 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 CCL19Q99731 98 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 PDZD2O15018 2839 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 IBA57-AS1B1ANH7 110 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
GINS3-202ENST00000328514 WIPF1O43516 503 aa7.96□□□□□ -1.13
GINS3-202ENST00000328514 LY6G6DO95868 133 aa7.96□□□□□ -1.13
GINS3-202ENST00000328514 CCL18P55774 89 aa7.96□□□□□ -1.13
GINS3-202ENST00000328514 DPH3Q96FX2 82 aa7.96□□□□□ -1.13
GINS3-202ENST00000328514 ZNF702PQ9H963 129 aa7.96□□□□□ -1.13
GINS3-202ENST00000328514 CSPG4Q6UVK1 2322 aa7.96□□□□□ -1.14
GINS3-202ENST00000328514 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 TMEM243Q9BU79 118 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 SLURP1P55000 103 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 ATP5J2P56134 94 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 ATP5EP2Q5VTU8 51 aa7.95□□□□□ -1.14
GINS3-202ENST00000328514 TRGV1A0A0A0MS02 117 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 IGKV3D-7A0A0C4DH55 119 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 SS18Q15532 418 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 C1orf158Q8N1D5 194 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
GINS3-202ENST00000328514 IGHV3OR16-9A0A0B4J2B5 98 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 J3QLI3 93 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 UBE2L6O14933 153 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 CCKP06307 115 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 MTORP42345 2549 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 LECT2O14960 151 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 DSCR9P59020 149 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 DEFB114Q30KQ6 69 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 ORMDL1Q9P0S3 153 aa7.93□□□□□ -1.14
GINS3-202ENST00000328514 A0A087WZ39 114 aa7.92□□□□□ -1.14
GINS3-202ENST00000328514 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
GINS3-202ENST00000328514 LINC00158P58513 81 aa7.92□□□□□ -1.14
GINS3-202ENST00000328514 SPG11Q96JI7 2443 aa7.92□□□□□ -1.14
GINS3-202ENST00000328514 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
GINS3-202ENST00000328514 NCR3O14931 201 aa7.91□□□□□ -1.14
GINS3-202ENST00000328514 AKAP9Q99996 3911 aa7.91□□□□□ -1.14
GINS3-202ENST00000328514 A0A087WVE0 104 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms