RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 A0A096LNI7 61 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 SMIM20Q8N5G0 67 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 ACANP16112 2415 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 LINC00959A0A1B0GUT2 108 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 UBE2D3P61077 147 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 UBE2D2P62837 147 aa6.55□□□□□ -1.36
CD28-201ENST00000324106 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
CD28-201ENST00000324106 BPY2O14599 106 aa6.53□□□□□ -1.36
CD28-201ENST00000324106 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
CD28-201ENST00000324106 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
CD28-201ENST00000324106 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
CD28-201ENST00000324106 KIAA1549Q9HCM3 1950 aa6.53□□□□□ -1.36
CD28-201ENST00000324106 COX17Q14061 63 aa6.53□□□□□ -1.36
CD28-201ENST00000324106 TCL1BO95988 128 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 CRIP1P50238 77 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 Q6ZTC4 211 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 FXYD2P54710 66 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 TMEM258P61165 79 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 RETNQ9HD89 108 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 F8WDY8 70 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 TIMM17BO60830 172 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 EGFEM1PQ0D2K5 195 aa6.52□□□□□ -1.37
CD28-201ENST00000324106 SEC61GP60059 68 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 NUPR1O60356 82 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 POLR2KP53803 58 aaKnown RBP6.51□□□□□ -1.37
CD28-201ENST00000324106 Q8IZM0 81 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 TSHBP01222 138 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 IGLV2-11P01706 119 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 C14orf132Q9NPU4 83 aa6.51□□□□□ -1.37
CD28-201ENST00000324106 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 Q8N2B8 174 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 HCFC1P51610 2035 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 ATOX1O00244 68 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 PRR9Q5T870 116 aa6.5□□□□□ -1.37
CD28-201ENST00000324106 CASC2Q6XLA1 102 aa6.49□□□□□ -1.37
CD28-201ENST00000324106 CLEC2BQ92478 149 aa6.49□□□□□ -1.37
CD28-201ENST00000324106 RNF185Q96GF1 192 aa6.49□□□□□ -1.37
CD28-201ENST00000324106 DMDP11532 3685 aa6.49□□□□□ -1.37
CD28-201ENST00000324106 CNFNQ9BYD5 112 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
CD28-201ENST00000324106 FHL3Q13643 280 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 WFDC9Q8NEX5 89 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 RNASE8Q8TDE3 154 aaKnown RBP6.47□□□□□ -1.37
CD28-201ENST00000324106 TANC2Q9HCD6 1990 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
CD28-201ENST00000324106 NRACQ8N912 160 aa6.47□□□□□ -1.37
CD28-201ENST00000324106 PRUNE2Q8WUY3 3088 aa6.46□□□□□ -1.38
CD28-201ENST00000324106 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
CD28-201ENST00000324106 M0QXV9 152 aa6.46□□□□□ -1.38
CD28-201ENST00000324106 PTH2Q96A98 100 aa6.46□□□□□ -1.38
CD28-201ENST00000324106 TNRC6BQ9UPQ9 1833 aaKnown RBP6.45□□□□□ -1.38
CD28-201ENST00000324106 G3V4G9 280 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 FHL2Q14192 279 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 CCKP06307 115 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 SPINK6Q6UWN8 80 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 MRPS12O15235 138 aaKnown RBP6.45□□□□□ -1.38
CD28-201ENST00000324106 BEAN1Q3B7T3 259 aa6.45□□□□□ -1.38
CD28-201ENST00000324106 RANBP2P49792 3224 aaKnown RBP6.44□□□□□ -1.38
CD28-201ENST00000324106 REV3LO60673 3130 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 ZNF73O43830 326 aaPredicted RBP6.44□□□□□ -1.38
CD28-201ENST00000324106 KRTAP24-1Q3LI83 254 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
CD28-201ENST00000324106 PRM2P04554 102 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 LINC00643Q86TS7 51 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
CD28-201ENST00000324106 Q6ZQY7 126 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
CD28-201ENST00000324106 SPTBN5Q9NRC6 3674 aaKnown RBP6.44□□□□□ -1.38
CD28-201ENST00000324106 A0A1B0GUV1 79 aa6.43□□□□□ -1.38
CD28-201ENST00000324106 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
CD28-201ENST00000324106 RAI1Q7Z5J4 1906 aaPredicted RBP6.42□□□□□ -1.38
CD28-201ENST00000324106 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
CD28-201ENST00000324106 C6orf223Q8N319 242 aa6.42□□□□□ -1.38
CD28-201ENST00000324106 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
CD28-201ENST00000324106 EDN2P20800 178 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 HECTD1Q9ULT8 2610 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 FOXI1Q12951 378 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms