RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 DNAL4O96015 105 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 INSP01308 110 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 UBE2E2Q96LR5 201 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 TRGV1A0A0A0MS02 117 aa12.77□□□□□ -0.37
PRKCB-202ENST00000321728 RPL28P46779 137 aaKnown RBP12.77□□□□□ -0.37
PRKCB-202ENST00000321728 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
PRKCB-202ENST00000321728 XCL2Q9UBD3 114 aa12.76□□□□□ -0.37
PRKCB-202ENST00000321728 RPL36AP83881 106 aaKnown RBP12.76□□□□□ -0.37
PRKCB-202ENST00000321728 NTM-AS1Q6ZSK4 140 aa12.76□□□□□ -0.37
PRKCB-202ENST00000321728 LINC00337Q8N6G1 96 aa12.76□□□□□ -0.37
PRKCB-202ENST00000321728 RPL36ALQ969Q0 106 aaKnown RBP12.76□□□□□ -0.37
PRKCB-202ENST00000321728 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
PRKCB-202ENST00000321728 C14orf132Q9NPU4 83 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 CDC42SE2Q9NRR3 84 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 PF4P02776 101 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 Q96MF0 132 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 A0A087WYN8 130 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 ATOX1O00244 68 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 SND1-IT1Q9HBX3 110 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 TOMM7Q9P0U1 55 aa12.75□□□□□ -0.37
PRKCB-202ENST00000321728 CSDC2Q9Y534 153 aaKnown RBP12.75□□□□□ -0.37
PRKCB-202ENST00000321728 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
PRKCB-202ENST00000321728 C2orf48Q96LS8 159 aa12.74□□□□□ -0.37
PRKCB-202ENST00000321728 IGKV3D-7A0A0C4DH55 119 aa12.73□□□□□ -0.37
PRKCB-202ENST00000321728 KHDC1LQ5JSQ8 128 aa12.73□□□□□ -0.37
PRKCB-202ENST00000321728 C9orf129Q5T035 196 aaKnown RBP12.73□□□□□ -0.37
PRKCB-202ENST00000321728 IGKV2-28A0A075B6P5 120 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 hADV29S1A0JD25 119 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 UBE2L6O14933 153 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 IGKV2D-28P01615 120 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 SMIM11BQ8TCY0 68 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 J3KT08 172 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 K7EQD1 137 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
PRKCB-202ENST00000321728 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
PRKCB-202ENST00000321728 CRYGAP11844 174 aa12.71□□□□□ -0.37
PRKCB-202ENST00000321728 LINC00158P58513 81 aa12.71□□□□□ -0.37
PRKCB-202ENST00000321728 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.38
PRKCB-202ENST00000321728 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.38
PRKCB-202ENST00000321728 ZNF469Q96JG9 3925 aaPredicted RBP12.71□□□□□ -0.38
PRKCB-202ENST00000321728 CCDC168Q8NDH2 2452 aa12.71□□□□□ -0.38
PRKCB-202ENST00000321728 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
PRKCB-202ENST00000321728 ZNF702PQ9H963 129 aa12.7□□□□□ -0.38
PRKCB-202ENST00000321728 A0A1B0GX51 115 aa12.69□□□□□ -0.38
PRKCB-202ENST00000321728 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
PRKCB-202ENST00000321728 Q6ZTI0 123 aa12.69□□□□□ -0.38
PRKCB-202ENST00000321728 LRRC75A-AS1Q8N1F1 130 aa12.69□□□□□ -0.38
PRKCB-202ENST00000321728 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
PRKCB-202ENST00000321728 LINC00846Q9NV44 126 aa12.68□□□□□ -0.38
PRKCB-202ENST00000321728 LECT2O14960 151 aa12.67□□□□□ -0.38
PRKCB-202ENST00000321728 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
PRKCB-202ENST00000321728 A0A087WVE0 104 aa12.66□□□□□ -0.38
PRKCB-202ENST00000321728 H0YGX0 51 aa12.66□□□□□ -0.38
PRKCB-202ENST00000321728 FAM19A5Q7Z5A7 132 aaPredicted RBP12.66□□□□□ -0.38
PRKCB-202ENST00000321728 NCR3O14931 201 aa12.66□□□□□ -0.38
PRKCB-202ENST00000321728 C11orf44Q8N8P7 122 aa12.66□□□□□ -0.38
PRKCB-202ENST00000321728 CYSTM1Q9H1C7 97 aa12.66□□□□□ -0.38
PRKCB-202ENST00000321728 CCL18P55774 89 aa12.65□□□□□ -0.38
PRKCB-202ENST00000321728 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
PRKCB-202ENST00000321728 OR13C6PQ8NH95 151 aa12.65□□□□□ -0.38
PRKCB-202ENST00000321728 SLPIP03973 132 aa12.65□□□□□ -0.39
PRKCB-202ENST00000321728 PFN2P35080 140 aa12.65□□□□□ -0.39
PRKCB-202ENST00000321728 Q6JHZ5 121 aa12.65□□□□□ -0.39
PRKCB-202ENST00000321728 STHQ8IWL8 128 aa12.65□□□□□ -0.39
PRKCB-202ENST00000321728 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
PRKCB-202ENST00000321728 LINC01356Q8N9X3 169 aa12.64□□□□□ -0.39
PRKCB-202ENST00000321728 PAX4O43316 350 aa12.64□□□□□ -0.39
PRKCB-202ENST00000321728 SERP2Q8N6R1 65 aa12.62□□□□□ -0.39
PRKCB-202ENST00000321728 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
PRKCB-202ENST00000321728 OBSCN-AS1Q96MR7 158 aa12.62□□□□□ -0.39
PRKCB-202ENST00000321728 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
PRKCB-202ENST00000321728 ODF3L2Q3SX64 289 aa12.61□□□□□ -0.39
PRKCB-202ENST00000321728 SETXQ7Z333 2677 aaKnown RBP12.61□□□□□ -0.39
PRKCB-202ENST00000321728 LOC100131303A0A0U1RQF7 123 aa12.6□□□□□ -0.39
PRKCB-202ENST00000321728 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
PRKCB-202ENST00000321728 PRB1P04280 392 aa12.6□□□□□ -0.39
PRKCB-202ENST00000321728 LINC01561Q8N1V8 128 aa12.6□□□□□ -0.39
PRKCB-202ENST00000321728 Q6YL49 198 aa12.59□□□□□ -0.39
PRKCB-202ENST00000321728 A0A1W2PRX2 142 aa12.59□□□□□ -0.39
PRKCB-202ENST00000321728 RPS28P62857 69 aaKnown RBP12.59□□□□□ -0.39
PRKCB-202ENST00000321728 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.4
PRKCB-202ENST00000321728 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
PRKCB-202ENST00000321728 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
PRKCB-202ENST00000321728 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
PRKCB-202ENST00000321728 C5orf47Q569G3 176 aa12.58□□□□□ -0.4
PRKCB-202ENST00000321728 TRGV2A0A075B6R0 118 aa12.57□□□□□ -0.4
PRKCB-202ENST00000321728 ORMDL1Q9P0S3 153 aa12.57□□□□□ -0.4
PRKCB-202ENST00000321728 C4orf3Q8WVX3 66 aa12.57□□□□□ -0.4
PRKCB-202ENST00000321728 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
PRKCB-202ENST00000321728 TMEM258P61165 79 aa12.56□□□□□ -0.4
PRKCB-202ENST00000321728 MTORP42345 2549 aa12.56□□□□□ -0.4
PRKCB-202ENST00000321728 NBPF19A0A087WUL8 3843 aa12.56□□□□□ -0.4
PRKCB-202ENST00000321728 IGHV3OR16-9A0A0B4J2B5 98 aa12.55□□□□□ -0.4
PRKCB-202ENST00000321728 J3QLI3 93 aa12.55□□□□□ -0.4
PRKCB-202ENST00000321728 DSCR9P59020 149 aa12.55□□□□□ -0.4
PRKCB-202ENST00000321728 KRTAP10-9P60411 292 aa12.55□□□□□ -0.4
PRKCB-202ENST00000321728 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
PRKCB-202ENST00000321728 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms