RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ATOX1O00244 68 aa12.1□□□□□ -0.47
SFXN1-201ENST00000321442 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
SFXN1-201ENST00000321442 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
SFXN1-201ENST00000321442 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
SFXN1-201ENST00000321442 PSMG3-AS1Q96PY0 264 aa12.1□□□□□ -0.47
SFXN1-201ENST00000321442 MUC4Q99102 2169 aa12.09□□□□□ -0.47
SFXN1-201ENST00000321442 ZNF561-AS1K7EIQ3 104 aa12.09□□□□□ -0.47
SFXN1-201ENST00000321442 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
SFXN1-201ENST00000321442 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
SFXN1-201ENST00000321442 STAB1Q9NY15 2570 aa12.09□□□□□ -0.47
SFXN1-201ENST00000321442 SLPIP03973 132 aa12.09□□□□□ -0.47
SFXN1-201ENST00000321442 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
SFXN1-201ENST00000321442 UBE2D3P61077 147 aa12.08□□□□□ -0.48
SFXN1-201ENST00000321442 UBE2D2P62837 147 aa12.08□□□□□ -0.48
SFXN1-201ENST00000321442 Q6YL49 198 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 CRYBG3Q68DQ2 2970 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 RNF152Q8N8N0 203 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 H7C423 109 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 DCANP1Q8TF63 244 aa12.07□□□□□ -0.48
SFXN1-201ENST00000321442 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
SFXN1-201ENST00000321442 UNC79Q9P2D8 2635 aa12.06□□□□□ -0.48
SFXN1-201ENST00000321442 ITPR2Q14571 2701 aa12.05□□□□□ -0.48
SFXN1-201ENST00000321442 LST1O00453 97 aa12.04□□□□□ -0.48
SFXN1-201ENST00000321442 NDUFA7O95182 113 aa12.04□□□□□ -0.48
SFXN1-201ENST00000321442 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
SFXN1-201ENST00000321442 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
SFXN1-201ENST00000321442 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 LY6G6DO95868 133 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 ZFHX4Q86UP3 3567 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
SFXN1-201ENST00000321442 COL6A5A8TX70 2615 aa12.02□□□□□ -0.48
SFXN1-201ENST00000321442 NCR3O14931 201 aa12.02□□□□□ -0.48
SFXN1-201ENST00000321442 ADAMTSL4-AS1Q5T5F5 129 aa12.02□□□□□ -0.48
SFXN1-201ENST00000321442 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.48
SFXN1-201ENST00000321442 CDIP1Q9H305 208 aa12.02□□□□□ -0.48
SFXN1-201ENST00000321442 ZANQ9Y493 2812 aa12.02□□□□□ -0.49
SFXN1-201ENST00000321442 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
SFXN1-201ENST00000321442 C16orf74Q96GX8 76 aa12.02□□□□□ -0.49
SFXN1-201ENST00000321442 NDUFA1O15239 70 aa12.01□□□□□ -0.49
SFXN1-201ENST00000321442 J3KT08 172 aa12.01□□□□□ -0.49
SFXN1-201ENST00000321442 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
SFXN1-201ENST00000321442 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
SFXN1-201ENST00000321442 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
SFXN1-201ENST00000321442 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
SFXN1-201ENST00000321442 UTP20O75691 2785 aaKnown RBP12□□□□□ -0.49
SFXN1-201ENST00000321442 PSMB8P28062 276 aa12□□□□□ -0.49
SFXN1-201ENST00000321442 DEFB105AQ8NG35 78 aa12□□□□□ -0.49
SFXN1-201ENST00000321442 UBE2D4Q9Y2X8 147 aa12□□□□□ -0.49
SFXN1-201ENST00000321442 MRPS36P82909 103 aaKnown RBP11.99□□□□□ -0.49
SFXN1-201ENST00000321442 UQCRQO14949 82 aa11.99□□□□□ -0.49
SFXN1-201ENST00000321442 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
SFXN1-201ENST00000321442 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
SFXN1-201ENST00000321442 DEFB114Q30KQ6 69 aa11.98□□□□□ -0.49
SFXN1-201ENST00000321442 ZNF702PQ9H963 129 aa11.98□□□□□ -0.49
SFXN1-201ENST00000321442 TIRAPP58753 221 aa11.98□□□□□ -0.49
SFXN1-201ENST00000321442 C20orf197Q8N268 126 aa11.97□□□□□ -0.49
SFXN1-201ENST00000321442 LINC01006Q8NI28 216 aa11.97□□□□□ -0.49
SFXN1-201ENST00000321442 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
SFXN1-201ENST00000321442 LINC00482Q8N8I6 264 aa11.96□□□□□ -0.49
SFXN1-201ENST00000321442 JMJD7-PLA2G4BH0Y9G9 81 aa11.96□□□□□ -0.5
SFXN1-201ENST00000321442 IGLV1-40P01703 118 aa11.96□□□□□ -0.5
SFXN1-201ENST00000321442 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
SFXN1-201ENST00000321442 IGHV4-28A0A0C4DH34 117 aa11.95□□□□□ -0.5
SFXN1-201ENST00000321442 NKAPP1Q8N9T2 125 aa11.95□□□□□ -0.5
SFXN1-201ENST00000321442 LOC100131303A0A0U1RQF7 123 aa11.95□□□□□ -0.5
SFXN1-201ENST00000321442 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
SFXN1-201ENST00000321442 KLK12Q9UKR0 248 aa11.94□□□□□ -0.5
SFXN1-201ENST00000321442 RPL18AQ02543 176 aaKnown RBP11.93□□□□□ -0.5
SFXN1-201ENST00000321442 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
SFXN1-201ENST00000321442 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
SFXN1-201ENST00000321442 SPAG11BQ08648 103 aa11.92□□□□□ -0.5
SFXN1-201ENST00000321442 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
SFXN1-201ENST00000321442 LINC00269Q8N2A0 174 aa11.92□□□□□ -0.5
SFXN1-201ENST00000321442 KIF25-AS1Q9Y6Z4 181 aa11.92□□□□□ -0.5
SFXN1-201ENST00000321442 TMEM256-PLSCR3K7ERE1 68 aa11.91□□□□□ -0.5
SFXN1-201ENST00000321442 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
SFXN1-201ENST00000321442 COX6A2Q02221 97 aa11.91□□□□□ -0.5
SFXN1-201ENST00000321442 TIMM17BO60830 172 aa11.9□□□□□ -0.5
SFXN1-201ENST00000321442 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
SFXN1-201ENST00000321442 LINC00694P0DN24 101 aa11.9□□□□□ -0.51
SFXN1-201ENST00000321442 SMIM11BQ8TCY0 68 aa11.9□□□□□ -0.51
SFXN1-201ENST00000321442 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
SFXN1-201ENST00000321442 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
SFXN1-201ENST00000321442 F8WEM9 126 aa11.89□□□□□ -0.51
SFXN1-201ENST00000321442 Q6ZSN1 163 aa11.89□□□□□ -0.51
SFXN1-201ENST00000321442 SCXQ7RTU7 201 aa11.89□□□□□ -0.51
SFXN1-201ENST00000321442 C6orf99Q4VX62 202 aa11.88□□□□□ -0.51
SFXN1-201ENST00000321442 C1orf43Q9BWL3 253 aa11.88□□□□□ -0.51
SFXN1-201ENST00000321442 PRO0255Q9UI72 69 aa11.88□□□□□ -0.51
SFXN1-201ENST00000321442 LINC00315P59091 139 aa11.88□□□□□ -0.51
SFXN1-201ENST00000321442 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 APOC4P55056 127 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 UPK3BQ9BT76 320 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 USP17L23D6RBM5 183 aa11.87□□□□□ -0.51
SFXN1-201ENST00000321442 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms