RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
PTPRA-202ENST00000318266 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 TLN2Q9Y4G6 2542 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 A0A087WYN8 130 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 SLURP1P55000 103 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 IGHV4-30-2A0A087WSY4 118 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 CRPP02741 224 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
PTPRA-202ENST00000318266 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 A0A1B0GX51 115 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 SLPIP03973 132 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 MIR7-3HGQ8N6C7 128 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 TRGV1A0A0A0MS02 117 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 HIST2H2BCQ6DN03 193 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 KIR2DL5BQ8NHK3 375 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 ANKRD17O75179 2603 aaKnown RBP6.91□□□□□ -1.3
PTPRA-202ENST00000318266 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 KHDC1LQ5JSQ8 128 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 Q96MF0 132 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 MXRA5Q9NR99 2828 aa6.91□□□□□ -1.3
PTPRA-202ENST00000318266 J3KT08 172 aa6.9□□□□□ -1.3
PTPRA-202ENST00000318266 C2orf48Q96LS8 159 aa6.9□□□□□ -1.3
PTPRA-202ENST00000318266 NCR3O14931 201 aa6.9□□□□□ -1.31
PTPRA-202ENST00000318266 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.31
PTPRA-202ENST00000318266 LINC00846Q9NV44 126 aa6.9□□□□□ -1.31
PTPRA-202ENST00000318266 MSMBP08118 114 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 LINC00158P58513 81 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 C11orf68Q9H3H3 251 aaKnown RBP6.89□□□□□ -1.31
PTPRA-202ENST00000318266 FBN2P35556 2912 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
PTPRA-202ENST00000318266 LECT2O14960 151 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 PFN2P35080 140 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 OR13C6PQ8NH95 151 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 C11orf72Q8NBR9 251 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 SMIM11BQ8TCY0 68 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
PTPRA-202ENST00000318266 ATOX1O00244 68 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 CXCL5P42830 114 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 HIST1H4AP62805 103 aaKnown RBP6.88□□□□□ -1.31
PTPRA-202ENST00000318266 CCDC168Q8NDH2 2452 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 CCL19Q99731 98 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 SMIM9A6NGZ8 99 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 F5H768 121 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 WFDC9Q8NEX5 89 aa6.88□□□□□ -1.31
PTPRA-202ENST00000318266 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
PTPRA-202ENST00000318266 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
PTPRA-202ENST00000318266 C10orf105Q8TEF2 133 aa6.87□□□□□ -1.31
PTPRA-202ENST00000318266 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
PTPRA-202ENST00000318266 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
PTPRA-202ENST00000318266 FAM222AQ5U5X8 452 aa6.87□□□□□ -1.31
PTPRA-202ENST00000318266 UBE2L6O14933 153 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 CRYGAP11844 174 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
PTPRA-202ENST00000318266 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
PTPRA-202ENST00000318266 Q6ZTI0 123 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
PTPRA-202ENST00000318266 PAX4O43316 350 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 RNF152Q8N8N0 203 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 INSP01308 110 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 MAP6D1Q9H9H5 199 aa6.86□□□□□ -1.31
PTPRA-202ENST00000318266 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
PTPRA-202ENST00000318266 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
PTPRA-202ENST00000318266 HILS1P60008 231 aa6.85□□□□□ -1.31
PTPRA-202ENST00000318266 LRRC75A-AS1Q8N1F1 130 aa6.85□□□□□ -1.31
PTPRA-202ENST00000318266 DYNLRB2Q8TF09 96 aa6.85□□□□□ -1.31
PTPRA-202ENST00000318266 FN1P02751 2386 aaKnown RBP6.85□□□□□ -1.31
PTPRA-202ENST00000318266 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 CCL18P55774 89 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 NOTCH2Q04721 2471 aa6.84□□□□□ -1.31
PTPRA-202ENST00000318266 K7EQD1 137 aa6.83□□□□□ -1.32
PTPRA-202ENST00000318266 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
PTPRA-202ENST00000318266 C11orf44Q8N8P7 122 aa6.83□□□□□ -1.32
PTPRA-202ENST00000318266 NF1P21359 2839 aa6.83□□□□□ -1.32
PTPRA-202ENST00000318266 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
PTPRA-202ENST00000318266 OXTP01178 125 aa6.82□□□□□ -1.32
PTPRA-202ENST00000318266 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
PTPRA-202ENST00000318266 B4DSR2 109 aa6.82□□□□□ -1.32
PTPRA-202ENST00000318266 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
PTPRA-202ENST00000318266 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
PTPRA-202ENST00000318266 PF4P02776 101 aa6.81□□□□□ -1.32
PTPRA-202ENST00000318266 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
PTPRA-202ENST00000318266 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
PTPRA-202ENST00000318266 AKAP9Q99996 3911 aa6.81□□□□□ -1.32
PTPRA-202ENST00000318266 IGLV4-60A0A075B6I1 120 aa6.81□□□□□ -1.32
PTPRA-202ENST00000318266 Q6JHZ5 121 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms