RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 HERVK_113P63121 156 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 C3orf56Q8N813 242 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 LINC00308Q8TCZ7 52 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 GAGE7O76087 117 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 LRRC75A-AS1Q8N1F1 130 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 GAGE6Q13070 117 aa10.71□□□□□ -0.69
TFE3-201ENST00000315869 PIK3CD-AS1Q5SR53 167 aa10.71□□□□□ -0.69
TFE3-201ENST00000315869 LINC00242Q5T6M2 205 aa10.71□□□□□ -0.69
TFE3-201ENST00000315869 LST1O00453 97 aa10.71□□□□□ -0.69
TFE3-201ENST00000315869 H3BT86 120 aa10.71□□□□□ -0.7
TFE3-201ENST00000315869 C11orf72Q8NBR9 251 aa10.71□□□□□ -0.7
TFE3-201ENST00000315869 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.7
TFE3-201ENST00000315869 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
TFE3-201ENST00000315869 NDUFA1O15239 70 aa10.7□□□□□ -0.7
TFE3-201ENST00000315869 CITED1Q99966 193 aa10.69□□□□□ -0.7
TFE3-201ENST00000315869 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
TFE3-201ENST00000315869 RS1O15537 224 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 Q8N2B8 174 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 LINC00158P58513 81 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 TIRAPP58753 221 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 CITED2Q99967 270 aaPredicted RBP10.68□□□□□ -0.7
TFE3-201ENST00000315869 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
TFE3-201ENST00000315869 VWFP04275 2813 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 K7EQD1 137 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 TRGV4A0A0C4DH28 118 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 Q9HAA7 133 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 KRTAP1-1Q07627 177 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
TFE3-201ENST00000315869 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 TENM1Q9UKZ4 2725 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 PFN2P35080 140 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 SOSTDC1Q6X4U4 206 aa10.66□□□□□ -0.7
TFE3-201ENST00000315869 BAALC-AS2P0C853 105 aa10.65□□□□□ -0.7
TFE3-201ENST00000315869 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
TFE3-201ENST00000315869 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.7
TFE3-201ENST00000315869 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.71
TFE3-201ENST00000315869 NHLRC4P0CG21 123 aaPredicted RBP10.64□□□□□ -0.71
TFE3-201ENST00000315869 M0QXV9 152 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 EDA2RQ9HAV5 297 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 ANK3Q12955 4377 aaKnown RBP10.64□□□□□ -0.71
TFE3-201ENST00000315869 CCL24O00175 119 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 COX7A2LO14548 114 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 CRPP02741 224 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
TFE3-201ENST00000315869 TIMM17BO60830 172 aa10.63□□□□□ -0.71
TFE3-201ENST00000315869 C5orf38Q86SI9 138 aa10.63□□□□□ -0.71
TFE3-201ENST00000315869 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
TFE3-201ENST00000315869 DAZ2Q13117 558 aaKnown RBP10.63□□□□□ -0.71
TFE3-201ENST00000315869 GAGE2AQ6NT46 116 aa10.63□□□□□ -0.71
TFE3-201ENST00000315869 DAZ4Q86SG3 579 aaKnown RBP10.63□□□□□ -0.71
TFE3-201ENST00000315869 MIR7-3HGQ8N6C7 128 aa10.63□□□□□ -0.71
TFE3-201ENST00000315869 DAZ3Q9NR90 486 aaKnown RBP10.63□□□□□ -0.71
TFE3-201ENST00000315869 DNAL4O96015 105 aa10.62□□□□□ -0.71
TFE3-201ENST00000315869 FBN1P35555 2871 aaKnown RBP10.62□□□□□ -0.71
TFE3-201ENST00000315869 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
TFE3-201ENST00000315869 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
TFE3-201ENST00000315869 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
TFE3-201ENST00000315869 PAX4O43316 350 aa10.61□□□□□ -0.71
TFE3-201ENST00000315869 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
TFE3-201ENST00000315869 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
TFE3-201ENST00000315869 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
TFE3-201ENST00000315869 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
TFE3-201ENST00000315869 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
TFE3-201ENST00000315869 IGLV5-45A0A087WSX0 123 aa10.59□□□□□ -0.71
TFE3-201ENST00000315869 A0A096LPF7 62 aa10.59□□□□□ -0.71
TFE3-201ENST00000315869 ATP5G1P05496 136 aa10.59□□□□□ -0.71
TFE3-201ENST00000315869 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 TRBV10-1A0A0K0K1A3 114 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 LINC01006Q8NI28 216 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 A8MTW9 85 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
TFE3-201ENST00000315869 LY6G6DO95868 133 aa10.57□□□□□ -0.72
TFE3-201ENST00000315869 FAM218AQ96MZ4 157 aa10.57□□□□□ -0.72
TFE3-201ENST00000315869 HERV-K104P63124 156 aa10.56□□□□□ -0.72
TFE3-201ENST00000315869 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
TFE3-201ENST00000315869 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
TFE3-201ENST00000315869 XCL1P47992 114 aa10.55□□□□□ -0.72
TFE3-201ENST00000315869 TRAV13-2A0A0B4J235 113 aa10.55□□□□□ -0.72
TFE3-201ENST00000315869 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
TFE3-201ENST00000315869 F5H768 121 aa10.54□□□□□ -0.72
TFE3-201ENST00000315869 Q6Q795 121 aa10.54□□□□□ -0.72
TFE3-201ENST00000315869 LINC00337Q8N6G1 96 aa10.53□□□□□ -0.72
TFE3-201ENST00000315869 SLPIP03973 132 aa10.52□□□□□ -0.72
TFE3-201ENST00000315869 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.72
TFE3-201ENST00000315869 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.73
TFE3-201ENST00000315869 FAM240AA0A1B0GVK7 77 aa10.52□□□□□ -0.73
TFE3-201ENST00000315869 LECT2O14960 151 aa10.52□□□□□ -0.73
TFE3-201ENST00000315869 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
TFE3-201ENST00000315869 TRAV25A0A0B4J276 109 aa10.51□□□□□ -0.73
TFE3-201ENST00000315869 TRACP01848 142 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms