RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IGKV3OR2-268A0A0C4DH90 116 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 TMEM238C9JI98 176 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 K7EP34 96 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 LITAFQ99732 161 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 ANK2Q01484 3957 aa12.77□□□□□ -0.37
CCDC43-201ENST00000315286 F5H768 121 aa12.76□□□□□ -0.37
CCDC43-201ENST00000315286 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
CCDC43-201ENST00000315286 TRAV26-1A0A087WT03 109 aa12.76□□□□□ -0.37
CCDC43-201ENST00000315286 APOMO95445 188 aa12.76□□□□□ -0.37
CCDC43-201ENST00000315286 MUSTN1Q8IVN3 82 aa12.75□□□□□ -0.37
CCDC43-201ENST00000315286 TMEM262E9PQX1 116 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 RETNQ9HD89 108 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 NDUFA1O15239 70 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 CFC1BP0CG36 223 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 CFC1P0CG37 223 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 HTN3P15516 51 aa12.74□□□□□ -0.37
CCDC43-201ENST00000315286 G3V4G9 280 aa12.73□□□□□ -0.37
CCDC43-201ENST00000315286 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
CCDC43-201ENST00000315286 A4D1N5 150 aa12.73□□□□□ -0.37
CCDC43-201ENST00000315286 RBX1P62877 108 aa12.72□□□□□ -0.37
CCDC43-201ENST00000315286 A0A1B0GUV1 79 aa12.71□□□□□ -0.37
CCDC43-201ENST00000315286 Q9H8V8 135 aa12.71□□□□□ -0.37
CCDC43-201ENST00000315286 DNAH3Q8TD57 4116 aa12.71□□□□□ -0.37
CCDC43-201ENST00000315286 PRSS2P07478 247 aa12.71□□□□□ -0.38
CCDC43-201ENST00000315286 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.38
CCDC43-201ENST00000315286 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
CCDC43-201ENST00000315286 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
CCDC43-201ENST00000315286 EIF4EBP3O60516 100 aaPredicted RBP12.69□□□□□ -0.38
CCDC43-201ENST00000315286 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
CCDC43-201ENST00000315286 LINC00959A0A1B0GUT2 108 aa12.69□□□□□ -0.38
CCDC43-201ENST00000315286 TSPAN13O95857 204 aa12.69□□□□□ -0.38
CCDC43-201ENST00000315286 NOTCH1P46531 2555 aa12.68□□□□□ -0.38
CCDC43-201ENST00000315286 TIMM17BO60830 172 aa12.68□□□□□ -0.38
CCDC43-201ENST00000315286 MIAQ16674 131 aa12.68□□□□□ -0.38
CCDC43-201ENST00000315286 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
CCDC43-201ENST00000315286 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
CCDC43-201ENST00000315286 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
CCDC43-201ENST00000315286 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
CCDC43-201ENST00000315286 NPC2P61916 151 aa12.66□□□□□ -0.38
CCDC43-201ENST00000315286 DAND5Q8N907 189 aa12.66□□□□□ -0.38
CCDC43-201ENST00000315286 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
CCDC43-201ENST00000315286 CLPSL2Q6UWE3 100 aa12.65□□□□□ -0.38
CCDC43-201ENST00000315286 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
CCDC43-201ENST00000315286 TENM3Q9P273 2699 aa12.65□□□□□ -0.38
CCDC43-201ENST00000315286 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.39
CCDC43-201ENST00000315286 C5orf38Q86SI9 138 aa12.65□□□□□ -0.39
CCDC43-201ENST00000315286 Q8N3U1 123 aa12.65□□□□□ -0.39
CCDC43-201ENST00000315286 A0A087WZ39 114 aa12.64□□□□□ -0.39
CCDC43-201ENST00000315286 A0A0B4J2C4 111 aa12.64□□□□□ -0.39
CCDC43-201ENST00000315286 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.63□□□□□ -0.39
CCDC43-201ENST00000315286 COX7B2Q8TF08 81 aa12.63□□□□□ -0.39
CCDC43-201ENST00000315286 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
CCDC43-201ENST00000315286 SS18Q15532 418 aa12.63□□□□□ -0.39
CCDC43-201ENST00000315286 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
CCDC43-201ENST00000315286 XCL1P47992 114 aa12.62□□□□□ -0.39
CCDC43-201ENST00000315286 LINC00269Q8N2A0 174 aa12.62□□□□□ -0.39
CCDC43-201ENST00000315286 LOC107984156A0A0G2JMH3 177 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 H3BMG7 143 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 HERV-K104P63124 156 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 SH2D6Q7Z4S9 175 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 ARL17AQ8IVW1 177 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 IFITM1P13164 125 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 LELP1Q5T871 98 aa12.61□□□□□ -0.39
CCDC43-201ENST00000315286 MEIG1Q5JSS6 88 aa12.6□□□□□ -0.39
CCDC43-201ENST00000315286 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
CCDC43-201ENST00000315286 NBEAL1Q6ZS30 2694 aa12.6□□□□□ -0.39
CCDC43-201ENST00000315286 ANGP03950 147 aaKnown RBP12.6□□□□□ -0.39
CCDC43-201ENST00000315286 Q6ZTC4 211 aa12.6□□□□□ -0.39
CCDC43-201ENST00000315286 ERG28Q9UKR5 140 aa12.59□□□□□ -0.39
CCDC43-201ENST00000315286 A0A0J9YWU9 116 aa12.58□□□□□ -0.39
CCDC43-201ENST00000315286 H7C2G1 150 aa12.58□□□□□ -0.39
CCDC43-201ENST00000315286 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.39
CCDC43-201ENST00000315286 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.39
CCDC43-201ENST00000315286 REG3AQ06141 175 aa12.57□□□□□ -0.4
CCDC43-201ENST00000315286 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
CCDC43-201ENST00000315286 KPRPQ5T749 579 aaPredicted RBP12.56□□□□□ -0.4
CCDC43-201ENST00000315286 SOSTDC1Q6X4U4 206 aa12.56□□□□□ -0.4
CCDC43-201ENST00000315286 PSMB2P49721 201 aa12.55□□□□□ -0.4
CCDC43-201ENST00000315286 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
CCDC43-201ENST00000315286 H3BNG1 76 aa12.55□□□□□ -0.4
CCDC43-201ENST00000315286 CHCHD10Q8WYQ3 142 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-201ENST00000315286 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
CCDC43-201ENST00000315286 Q1RN00 199 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 CD164L2Q6UWJ8 174 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 MTURNQ8N3F0 131 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 F8W1H4 67 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 TCL1BO95988 128 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 WFDC2Q14508 124 aa12.53□□□□□ -0.4
CCDC43-201ENST00000315286 C6orf226Q5I0X4 101 aa12.52□□□□□ -0.4
CCDC43-201ENST00000315286 PRO0461Q9UI25 63 aa12.52□□□□□ -0.4
CCDC43-201ENST00000315286 LINC01561Q8N1V8 128 aa12.52□□□□□ -0.41
CCDC43-201ENST00000315286 C11orf45Q8TAV5 145 aa12.52□□□□□ -0.41
CCDC43-201ENST00000315286 COPS9Q8WXC6 57 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms