RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
SPAST-201ENST00000315285 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
SPAST-201ENST00000315285 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
SPAST-201ENST00000315285 HILS1P60008 231 aa10□□□□□ -0.81
SPAST-201ENST00000315285 SMIM11BQ8TCY0 68 aa10□□□□□ -0.81
SPAST-201ENST00000315285 DOPEY1Q5JWR5 2465 aa9.99□□□□□ -0.81
SPAST-201ENST00000315285 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
SPAST-201ENST00000315285 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
SPAST-201ENST00000315285 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
SPAST-201ENST00000315285 NDUFA7O95182 113 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
SPAST-201ENST00000315285 LY6G6DO95868 133 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
SPAST-201ENST00000315285 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
SPAST-201ENST00000315285 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
SPAST-201ENST00000315285 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
SPAST-201ENST00000315285 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
SPAST-201ENST00000315285 LELP1Q5T871 98 aa9.96□□□□□ -0.81
SPAST-201ENST00000315285 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.81
SPAST-201ENST00000315285 KIR2DL5BQ8NHK3 375 aa9.96□□□□□ -0.81
SPAST-201ENST00000315285 IMUPQ9GZP8 106 aa9.96□□□□□ -0.81
SPAST-201ENST00000315285 Q6ZQY7 126 aa9.96□□□□□ -0.82
SPAST-201ENST00000315285 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
SPAST-201ENST00000315285 Q8IZM0 81 aa9.95□□□□□ -0.82
SPAST-201ENST00000315285 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
SPAST-201ENST00000315285 AMELXQ99217 191 aa9.95□□□□□ -0.82
SPAST-201ENST00000315285 PKD1L2Q7Z442 2459 aa9.94□□□□□ -0.82
SPAST-201ENST00000315285 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
SPAST-201ENST00000315285 KPRPQ5T749 579 aaPredicted RBP9.94□□□□□ -0.82
SPAST-201ENST00000315285 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
SPAST-201ENST00000315285 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 B9D2Q9BPU9 175 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 CLUHP3Q96NS8 147 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 COX6A2Q02221 97 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 CCKP06307 115 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 COX17Q14061 63 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
SPAST-201ENST00000315285 H0Y9J4 135 aa9.92□□□□□ -0.82
SPAST-201ENST00000315285 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
SPAST-201ENST00000315285 IGLV1-51P01701 117 aa9.92□□□□□ -0.82
SPAST-201ENST00000315285 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
SPAST-201ENST00000315285 SHISA2Q6UWI4 295 aa9.91□□□□□ -0.82
SPAST-201ENST00000315285 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
SPAST-201ENST00000315285 COL4A2P08572 1712 aa9.91□□□□□ -0.82
SPAST-201ENST00000315285 USP17L23D6RBM5 183 aa9.91□□□□□ -0.82
SPAST-201ENST00000315285 LRRK2Q5S007 2527 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 M0R378 163 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 BEAN1Q3B7T3 259 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
SPAST-201ENST00000315285 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 Q6ZSN1 163 aa9.9□□□□□ -0.82
SPAST-201ENST00000315285 KIF25-AS1Q9Y6Z4 181 aa9.9□□□□□ -0.83
SPAST-201ENST00000315285 A0A087WZ39 114 aa9.89□□□□□ -0.83
SPAST-201ENST00000315285 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
SPAST-201ENST00000315285 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
SPAST-201ENST00000315285 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
SPAST-201ENST00000315285 CYSRT1A8MQ03 144 aa9.89□□□□□ -0.83
SPAST-201ENST00000315285 A0A096LNI7 61 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 MTORP42345 2549 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
SPAST-201ENST00000315285 PRRC2CQ9Y520 2896 aaKnown RBP9.88□□□□□ -0.83
SPAST-201ENST00000315285 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
SPAST-201ENST00000315285 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
SPAST-201ENST00000315285 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
SPAST-201ENST00000315285 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
SPAST-201ENST00000315285 AGRNO00468 2067 aa9.87□□□□□ -0.83
SPAST-201ENST00000315285 FHL2Q14192 279 aa9.86□□□□□ -0.83
SPAST-201ENST00000315285 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
SPAST-201ENST00000315285 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
SPAST-201ENST00000315285 Q6Q795 121 aa9.86□□□□□ -0.83
SPAST-201ENST00000315285 IGHV4-30-4P0DP06 118 aa9.86□□□□□ -0.83
SPAST-201ENST00000315285 CHKB-CPT1BH3BT56 60 aa9.85□□□□□ -0.83
SPAST-201ENST00000315285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
SPAST-201ENST00000315285 NDUFC2O95298 119 aa9.85□□□□□ -0.83
SPAST-201ENST00000315285 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
SPAST-201ENST00000315285 COX7CP15954 63 aa9.84□□□□□ -0.83
SPAST-201ENST00000315285 SMR3AQ99954 134 aa9.84□□□□□ -0.83
SPAST-201ENST00000315285 Q6JHZ5 121 aa9.84□□□□□ -0.83
SPAST-201ENST00000315285 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
SPAST-201ENST00000315285 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
SPAST-201ENST00000315285 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.84□□□□□ -0.83
SPAST-201ENST00000315285 DHRS4-AS1Q9P1J3 65 aa9.83□□□□□ -0.84
SPAST-201ENST00000315285 UTRNP46939 3433 aa9.83□□□□□ -0.84
SPAST-201ENST00000315285 POLQO75417 2590 aa9.83□□□□□ -0.84
SPAST-201ENST00000315285 ZNF462Q96JM2 2506 aa9.83□□□□□ -0.84
SPAST-201ENST00000315285 OXLD1Q5BKU9 147 aa9.82□□□□□ -0.84
SPAST-201ENST00000315285 LINC00315P59091 139 aa9.82□□□□□ -0.84
SPAST-201ENST00000315285 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
SPAST-201ENST00000315285 A0A087WYN8 130 aa9.81□□□□□ -0.84
SPAST-201ENST00000315285 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
SPAST-201ENST00000315285 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
SPAST-201ENST00000315285 Q8N814 137 aa9.81□□□□□ -0.84
SPAST-201ENST00000315285 PLA2G2AP14555 144 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms