RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 C5orf38Q86SI9 138 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 C14orf132Q9NPU4 83 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 LY6HO94772 140 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 CRYGAP11844 174 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 CENPFP49454 3210 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 IGHV4-38-2P0DP08 117 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 C2orf48Q96LS8 159 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 CR1P17927 2039 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 BPTFQ12830 3046 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 IGHV3-38A0A0C4DH36 116 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 ASPHD1Q5U4P2 390 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 SLURP1P55000 103 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 J3QKU1 62 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 CENPEQ02224 2701 aa6.5□□□□□ -1.37
COL6A5-202ENST00000312481 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
COL6A5-202ENST00000312481 SBSPONQ8IVN8 264 aa6.49□□□□□ -1.37
COL6A5-202ENST00000312481 IGHV4-30-2A0A087WSY4 118 aa6.49□□□□□ -1.37
COL6A5-202ENST00000312481 SPRY2O43597 315 aa6.48□□□□□ -1.37
COL6A5-202ENST00000312481 SPRNQ5BIV9 151 aa6.48□□□□□ -1.37
COL6A5-202ENST00000312481 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
COL6A5-202ENST00000312481 FLNAP21333 2647 aaKnown RBP6.48□□□□□ -1.37
COL6A5-202ENST00000312481 CHCHD10Q8WYQ3 142 aaPredicted RBP6.48□□□□□ -1.37
COL6A5-202ENST00000312481 PRB4P10163 310 aaPredicted RBP6.48□□□□□ -1.37
COL6A5-202ENST00000312481 IGLV4-69A0A075B6H9 119 aa6.48□□□□□ -1.37
COL6A5-202ENST00000312481 HILS1P60008 231 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 WFDC9Q8NEX5 89 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 PRYO14603 147 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
COL6A5-202ENST00000312481 Q8N814 137 aa6.46□□□□□ -1.37
COL6A5-202ENST00000312481 H3BNG1 76 aa6.46□□□□□ -1.38
COL6A5-202ENST00000312481 XGP55808 180 aa6.46□□□□□ -1.38
COL6A5-202ENST00000312481 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
COL6A5-202ENST00000312481 A0A1W2PNU3 283 aaPredicted RBP6.46□□□□□ -1.38
COL6A5-202ENST00000312481 NTM-AS1Q6ZSK4 140 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 FAM19A4Q96LR4 140 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 AKAP13Q12802 2813 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
COL6A5-202ENST00000312481 SDIM1Q6ZPB5 146 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 FRMD6-AS1P0C7T7 363 aa6.45□□□□□ -1.38
COL6A5-202ENST00000312481 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
COL6A5-202ENST00000312481 NHLRC4P0CG21 123 aaPredicted RBP6.44□□□□□ -1.38
COL6A5-202ENST00000312481 C20orf197Q8N268 126 aa6.44□□□□□ -1.38
COL6A5-202ENST00000312481 DNAJC9-AS1A6NH13 148 aa6.44□□□□□ -1.38
COL6A5-202ENST00000312481 SMIM1B2RUZ4 78 aa6.44□□□□□ -1.38
COL6A5-202ENST00000312481 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
COL6A5-202ENST00000312481 NRGNQ92686 78 aa6.43□□□□□ -1.38
COL6A5-202ENST00000312481 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
COL6A5-202ENST00000312481 LOC110117498A0A087WWA1 95 aa6.43□□□□□ -1.38
COL6A5-202ENST00000312481 C16orf95Q9H693 158 aa6.43□□□□□ -1.38
COL6A5-202ENST00000312481 TRANK1O15050 2925 aa6.43□□□□□ -1.38
COL6A5-202ENST00000312481 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 FAM30AQ9NZY2 134 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 A0A096LNJ9 63 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 IGHV4-31P0DP07 118 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
COL6A5-202ENST00000312481 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
COL6A5-202ENST00000312481 Q8N2B8 174 aa6.41□□□□□ -1.38
COL6A5-202ENST00000312481 KLK12Q9UKR0 248 aa6.41□□□□□ -1.38
COL6A5-202ENST00000312481 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
COL6A5-202ENST00000312481 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
COL6A5-202ENST00000312481 TRAV10A0A0B4J240 114 aa6.4□□□□□ -1.38
COL6A5-202ENST00000312481 LINC00959A0A1B0GUT2 108 aa6.4□□□□□ -1.38
COL6A5-202ENST00000312481 PRO0628Q9UI54 55 aa6.4□□□□□ -1.38
COL6A5-202ENST00000312481 SHISA2Q6UWI4 295 aa6.4□□□□□ -1.38
COL6A5-202ENST00000312481 Q6ZTI0 123 aa6.4□□□□□ -1.39
COL6A5-202ENST00000312481 C11orf45Q8TAV5 145 aa6.4□□□□□ -1.39
COL6A5-202ENST00000312481 F8W735 103 aaPredicted RBP6.4□□□□□ -1.39
COL6A5-202ENST00000312481 C6orf99Q4VX62 202 aa6.4□□□□□ -1.39
COL6A5-202ENST00000312481 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
COL6A5-202ENST00000312481 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
COL6A5-202ENST00000312481 Q6ZQT7 251 aa6.39□□□□□ -1.39
COL6A5-202ENST00000312481 IGLV1-51P01701 117 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 A0A0U1RQV1 116 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 DEFB136Q30KP8 78 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 CLPSL2Q6UWE3 100 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 ZNF292O60281 2723 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 CFAP46Q8IYW2 2715 aa6.38□□□□□ -1.39
COL6A5-202ENST00000312481 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
COL6A5-202ENST00000312481 GRNP28799 593 aaKnown RBP6.36□□□□□ -1.39
COL6A5-202ENST00000312481 LINC00482Q8N8I6 264 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 PRO0461Q9UI25 63 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms