RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 MYO18BQ8IUG5 2567 aa6.92□□□□□ -1.3
RBFOX1-201ENST00000311745 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 F6UB75 175 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 M0R381 172 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 DSCR9P59020 149 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 FAM229BQ4G0N7 80 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 ZNF702PQ9H963 129 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 A0A0J9YXY3 114 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 AMELXQ99217 191 aa6.91□□□□□ -1.3
RBFOX1-201ENST00000311745 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.3
RBFOX1-201ENST00000311745 Q6JHZ5 121 aa6.9□□□□□ -1.3
RBFOX1-201ENST00000311745 ENHOQ6UWT2 76 aa6.9□□□□□ -1.31
RBFOX1-201ENST00000311745 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.31
RBFOX1-201ENST00000311745 APOC4P55056 127 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 Q6YL49 198 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 DOPEY2Q9Y3R5 2298 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 SPG11Q96JI7 2443 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 RHPN1-AS1Q9BWJ2 59 aa6.89□□□□□ -1.31
RBFOX1-201ENST00000311745 USP9YO00507 2555 aaPredicted RBP6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 KLLNB2CW77 178 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 K7EMT4 169 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 LINC00315P59091 139 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 C18orf65Q6ZTR6 163 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 LEPROTO15243 131 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 UBE2E2Q96LR5 201 aa6.88□□□□□ -1.31
RBFOX1-201ENST00000311745 Q8N2B8 174 aa6.87□□□□□ -1.31
RBFOX1-201ENST00000311745 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
RBFOX1-201ENST00000311745 PLAC8L1A1L4L8 177 aa6.87□□□□□ -1.31
RBFOX1-201ENST00000311745 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
RBFOX1-201ENST00000311745 TSHBP01222 138 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 ITPR3Q14573 2671 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 NIPBLQ6KC79 2804 aaeCLIP6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 TRAV21A0A0B4J279 112 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 PSPHP1O15172 72 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 GNRH2O43555 120 aa6.86□□□□□ -1.31
RBFOX1-201ENST00000311745 NF1P21359 2839 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 COX7A2LO14548 114 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 Q6ZRU5 148 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 CSPG4Q6UVK1 2322 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 IGHV4OR15-8A0A075B7B6 117 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 A0A087WW49 117 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 DEFB113Q30KQ7 82 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 LRRK2Q5S007 2527 aa6.85□□□□□ -1.31
RBFOX1-201ENST00000311745 S100A4P26447 101 aaKnown RBP6.84□□□□□ -1.31
RBFOX1-201ENST00000311745 VSIG2Q96IQ7 327 aa6.84□□□□□ -1.31
RBFOX1-201ENST00000311745 KRTAP1-1Q07627 177 aa6.84□□□□□ -1.31
RBFOX1-201ENST00000311745 NDUFA12Q9UI09 145 aa6.84□□□□□ -1.31
RBFOX1-201ENST00000311745 F5H697 171 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 K7EQG2 157 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 NCR3O14931 201 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 ABCA12Q86UK0 2595 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
RBFOX1-201ENST00000311745 IGKV3-7A0A075B6H7 116 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 TRBV27A0A0K0K1C4 114 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 A8MTW9 85 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 MIAQ16674 131 aa6.82□□□□□ -1.32
RBFOX1-201ENST00000311745 A0A0J9YX75 114 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 DGAT2L7PQ6IED9 249 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 ZNF876PQ49A33 203 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 FAM222AQ5U5X8 452 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 PTPN13Q12923 2485 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 SDHAF1A6NFY7 115 aa6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 PRB2P02812 416 aaPredicted RBP6.81□□□□□ -1.32
RBFOX1-201ENST00000311745 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 DEFB136Q30KP8 78 aa6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
RBFOX1-201ENST00000311745 IGHV3-16A0A0C4DH30 117 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 ESRGQ1W209 222 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 SLURP1P55000 103 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 LITAFQ99732 161 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 ESM1Q9NQ30 184 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 CHD6Q8TD26 2715 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
RBFOX1-201ENST00000311745 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms