RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 UBE2D1P51668 147 aa11.48□□□□□ -0.57
CCS-201ENST00000310190 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
CCS-201ENST00000310190 TEX43Q6ZNM6 134 aa11.48□□□□□ -0.57
CCS-201ENST00000310190 F8WDY8 70 aa11.47□□□□□ -0.57
CCS-201ENST00000310190 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
CCS-201ENST00000310190 Q6ZN92 141 aa11.47□□□□□ -0.57
CCS-201ENST00000310190 FA2HQ7L5A8 372 aa11.47□□□□□ -0.57
CCS-201ENST00000310190 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
CCS-201ENST00000310190 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
CCS-201ENST00000310190 APOMO95445 188 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 RAB5BP61020 215 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 CHAC1Q9BUX1 264 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 VCX2Q9H322 139 aa11.46□□□□□ -0.57
CCS-201ENST00000310190 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
CCS-201ENST00000310190 A0A087WZ39 114 aa11.45□□□□□ -0.58
CCS-201ENST00000310190 LINC00614P0C842 121 aa11.45□□□□□ -0.58
CCS-201ENST00000310190 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
CCS-201ENST00000310190 SEC11AP67812 179 aa11.44□□□□□ -0.58
CCS-201ENST00000310190 A0A096LNJ9 63 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 MALP21145 153 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 SCGB3A1Q96QR1 104 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 ABCA13Q86UQ4 5058 aa11.43□□□□□ -0.58
CCS-201ENST00000310190 COLCA2A8K830 154 aa11.42□□□□□ -0.58
CCS-201ENST00000310190 ZNF561-AS1K7EIQ3 104 aa11.42□□□□□ -0.58
CCS-201ENST00000310190 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
CCS-201ENST00000310190 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
CCS-201ENST00000310190 COX6A2Q02221 97 aa11.4□□□□□ -0.58
CCS-201ENST00000310190 SYCNQ0VAF6 134 aa11.4□□□□□ -0.58
CCS-201ENST00000310190 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
CCS-201ENST00000310190 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
CCS-201ENST00000310190 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
CCS-201ENST00000310190 HBDP02042 147 aa11.39□□□□□ -0.59
CCS-201ENST00000310190 HERVK_113P63121 156 aa11.39□□□□□ -0.59
CCS-201ENST00000310190 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
CCS-201ENST00000310190 IGLV4-69A0A075B6H9 119 aa11.38□□□□□ -0.59
CCS-201ENST00000310190 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
CCS-201ENST00000310190 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
CCS-201ENST00000310190 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
CCS-201ENST00000310190 TINCRA0A1B0GVN0 87 aa11.37□□□□□ -0.59
CCS-201ENST00000310190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.37□□□□□ -0.59
CCS-201ENST00000310190 TRGC2P03986 189 aa11.37□□□□□ -0.59
CCS-201ENST00000310190 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
CCS-201ENST00000310190 ZC2HC1BQ5TFG8 222 aa11.37□□□□□ -0.59
CCS-201ENST00000310190 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
CCS-201ENST00000310190 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
CCS-201ENST00000310190 SPAG11BQ08648 103 aa11.36□□□□□ -0.59
CCS-201ENST00000310190 PMVKQ15126 192 aa11.36□□□□□ -0.59
CCS-201ENST00000310190 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CCS-201ENST00000310190 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
CCS-201ENST00000310190 EPM2AB3EWF7 344 aa11.35□□□□□ -0.59
CCS-201ENST00000310190 PANO1I0J062 215 aa11.35□□□□□ -0.59
CCS-201ENST00000310190 ORAOV1Q8WV07 137 aa11.35□□□□□ -0.59
CCS-201ENST00000310190 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
CCS-201ENST00000310190 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
CCS-201ENST00000310190 ATP5LO75964 103 aa11.34□□□□□ -0.59
CCS-201ENST00000310190 Q6ZRU5 148 aa11.34□□□□□ -0.59
CCS-201ENST00000310190 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
CCS-201ENST00000310190 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
CCS-201ENST00000310190 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
CCS-201ENST00000310190 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
CCS-201ENST00000310190 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
CCS-201ENST00000310190 Q5VSD8 79 aa11.32□□□□□ -0.6
CCS-201ENST00000310190 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
CCS-201ENST00000310190 CDKN2A-AS1Q9UH64 79 aa11.32□□□□□ -0.6
CCS-201ENST00000310190 NDUFA1O15239 70 aa11.31□□□□□ -0.6
CCS-201ENST00000310190 SMR3BP02814 79 aaPredicted RBP11.31□□□□□ -0.6
CCS-201ENST00000310190 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
CCS-201ENST00000310190 HAMPP81172 84 aa11.31□□□□□ -0.6
CCS-201ENST00000310190 Q8IZM0 81 aa11.31□□□□□ -0.6
CCS-201ENST00000310190 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
CCS-201ENST00000310190 A0A087WYN8 130 aa11.29□□□□□ -0.6
CCS-201ENST00000310190 A0A096LNI7 61 aa11.29□□□□□ -0.6
CCS-201ENST00000310190 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
CCS-201ENST00000310190 LINC00528Q8N1L1 170 aa11.29□□□□□ -0.6
CCS-201ENST00000310190 TRAV12-1A0A0B4J245 112 aa11.28□□□□□ -0.6
CCS-201ENST00000310190 PTTG1IPP53801 180 aa11.28□□□□□ -0.6
CCS-201ENST00000310190 LINC00310P59036 64 aa11.28□□□□□ -0.6
CCS-201ENST00000310190 PMCHL1Q16048 86 aa11.28□□□□□ -0.6
CCS-201ENST00000310190 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
CCS-201ENST00000310190 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
CCS-201ENST00000310190 PLA2G1BP04054 148 aaKnown RBP11.27□□□□□ -0.61
CCS-201ENST00000310190 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
CCS-201ENST00000310190 KRTAP10-4P60372 401 aaPredicted RBP11.27□□□□□ -0.61
CCS-201ENST00000310190 HSBP1O75506 76 aa11.26□□□□□ -0.61
CCS-201ENST00000310190 CXCL5P42830 114 aa11.26□□□□□ -0.61
CCS-201ENST00000310190 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
CCS-201ENST00000310190 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
CCS-201ENST00000310190 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
CCS-201ENST00000310190 SCO1O75880 301 aa11.25□□□□□ -0.61
CCS-201ENST00000310190 ODF1Q14990 250 aa11.25□□□□□ -0.61
CCS-201ENST00000310190 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
CCS-201ENST00000310190 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
CCS-201ENST00000310190 PKHD1L1Q86WI1 4243 aa11.24□□□□□ -0.61
CCS-201ENST00000310190 IGLV5-39A0A0G2JS06 123 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms