RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 HIST1H2BDP58876 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST1H2BCP62807 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST2H2BEQ16778 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.93□□□□□ -1.46
PDE4D-201ENST00000309641 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST1H2BHQ93079 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST1H2BNQ99877 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 HIST1H2BMQ99879 126 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 VCX2Q9H322 139 aa5.93□□□□□ -1.46
PDE4D-201ENST00000309641 IGLV5-52A0A0A0MRZ9 124 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 HBDP02042 147 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 G0S2P27469 103 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 RAB5BP61020 215 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 Q6ZN92 141 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 PGPEP1Q9NXJ5 209 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 PDZD11Q5EBL8 140 aa5.92□□□□□ -1.46
PDE4D-201ENST00000309641 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
PDE4D-201ENST00000309641 A0A0J9YXV3 536 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 hDV102S1A0JD36 115 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 COX7A2LO14548 114 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 HSBP1O75506 76 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 NPSP0C0P6 89 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
PDE4D-201ENST00000309641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.9□□□□□ -1.47
PDE4D-201ENST00000309641 C2orf88Q9BSF0 95 aa5.9□□□□□ -1.47
PDE4D-201ENST00000309641 MALP21145 153 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 GCSHP23434 173 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 NDUFA6P56556 154 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 PMVKQ15126 192 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 CDPF1Q6NVV7 123 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
PDE4D-201ENST00000309641 IGHV1-58A0A0C4DH39 117 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 LINC01549A6NIU2 74 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
PDE4D-201ENST00000309641 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
PDE4D-201ENST00000309641 A0A087WZ39 114 aa5.88□□□□□ -1.47
PDE4D-201ENST00000309641 HAMPP81172 84 aa5.88□□□□□ -1.47
PDE4D-201ENST00000309641 FAM19A3Q7Z5A8 133 aa5.88□□□□□ -1.47
PDE4D-201ENST00000309641 IGLV4-69A0A075B6H9 119 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 ATP5LO75964 103 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 C21orf62-AS1Q17RA5 79 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 FABP4P15090 132 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 CNBPP62633 177 aaKnown RBP5.87□□□□□ -1.47
PDE4D-201ENST00000309641 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 ORAOV1Q8WV07 137 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 IFI27L1Q96BM0 104 aa5.87□□□□□ -1.47
PDE4D-201ENST00000309641 IGHV3-64A0A075B6Q5 118 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
PDE4D-201ENST00000309641 HSPG2P98160 4391 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 TINCRA0A1B0GVN0 87 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 H0Y8G0 127 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 PANO1I0J062 215 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 LEPROTL1O95214 131 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 HERVK_113P63121 156 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 SPAG11BQ08648 103 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 KIAA0087Q14695 138 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
PDE4D-201ENST00000309641 C11orf86A6NJI1 115 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 XGP55808 180 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 C10orf25Q5T742 122 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 Q6ZRU5 148 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 CHAC1Q9BUX1 264 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 RYR1P21817 5038 aa5.85□□□□□ -1.47
PDE4D-201ENST00000309641 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
PDE4D-201ENST00000309641 APOMO95445 188 aa5.84□□□□□ -1.47
PDE4D-201ENST00000309641 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
PDE4D-201ENST00000309641 COA6Q5JTJ3 125 aaKnown RBP5.84□□□□□ -1.47
PDE4D-201ENST00000309641 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
PDE4D-201ENST00000309641 SMIM1B2RUZ4 78 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 SPINK8P0C7L1 97 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.48
PDE4D-201ENST00000309641 SEC11AP67812 179 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 MRPL35Q9NZE8 188 aaKnown RBP5.84□□□□□ -1.48
PDE4D-201ENST00000309641 TOMM7Q9P0U1 55 aa5.84□□□□□ -1.48
PDE4D-201ENST00000309641 CHTOPQ9Y3Y2 248 aaKnown RBP5.84□□□□□ -1.48
PDE4D-201ENST00000309641 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-201ENST00000309641 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 ODF1Q14990 250 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 UNQ6190/PRO20217Q6UXQ8 127 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 Q6ZSA8 131 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 CAMK2N2Q96S95 79 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-201ENST00000309641 DNAH8Q96JB1 4490 aa5.83□□□□□ -1.48
PDE4D-201ENST00000309641 TRAV12-1A0A0B4J245 112 aa5.82□□□□□ -1.48
PDE4D-201ENST00000309641 PMCHL2Q9BQD1 86 aa5.82□□□□□ -1.48
PDE4D-201ENST00000309641 CDK2AP2O75956 126 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms