RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LINC00242Q5T6M2 205 aa11.78□□□□□ -0.52
SSSCA1-201ENST00000309328 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
SSSCA1-201ENST00000309328 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
SSSCA1-201ENST00000309328 HSPB8Q9UJY1 196 aa11.78□□□□□ -0.52
SSSCA1-201ENST00000309328 LECT2O14960 151 aa11.77□□□□□ -0.53
SSSCA1-201ENST00000309328 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.53
SSSCA1-201ENST00000309328 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.53
SSSCA1-201ENST00000309328 PKD1P98161 4303 aa11.77□□□□□ -0.53
SSSCA1-201ENST00000309328 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 LEPROTL1O95214 131 aa11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 LINC00310P59036 64 aa11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 WFDC2Q14508 124 aa11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 COA6Q5JTJ3 125 aaKnown RBP11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 IFI27L1Q96BM0 104 aa11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 DNAH11Q96DT5 4516 aa11.76□□□□□ -0.53
SSSCA1-201ENST00000309328 A0A087WZ39 114 aa11.75□□□□□ -0.53
SSSCA1-201ENST00000309328 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
SSSCA1-201ENST00000309328 TINCRA0A1B0GVN0 87 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 PRSS1P07477 247 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 OR10D4PQ8NGN7 298 aa11.74□□□□□ -0.53
SSSCA1-201ENST00000309328 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 C16orf90A8MZG2 172 aa11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 F8WDY8 70 aa11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 NDUFA6P56556 154 aa11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 CNBPP62633 177 aaKnown RBP11.73□□□□□ -0.53
SSSCA1-201ENST00000309328 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
SSSCA1-201ENST00000309328 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
SSSCA1-201ENST00000309328 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
SSSCA1-201ENST00000309328 PKHD1P08F94 4074 aa11.71□□□□□ -0.53
SSSCA1-201ENST00000309328 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
SSSCA1-201ENST00000309328 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 H3BRM9 83 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 IGLC3P0DOY3 106 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
SSSCA1-201ENST00000309328 NUPR1O60356 82 aa11.69□□□□□ -0.54
SSSCA1-201ENST00000309328 GCSHP23434 173 aa11.69□□□□□ -0.54
SSSCA1-201ENST00000309328 COX6A2Q02221 97 aa11.69□□□□□ -0.54
SSSCA1-201ENST00000309328 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
SSSCA1-201ENST00000309328 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
SSSCA1-201ENST00000309328 MAP1LC3CQ9BXW4 147 aa11.68□□□□□ -0.54
SSSCA1-201ENST00000309328 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
SSSCA1-201ENST00000309328 SPAG11BQ08648 103 aa11.67□□□□□ -0.54
SSSCA1-201ENST00000309328 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
SSSCA1-201ENST00000309328 ORAOV1Q8WV07 137 aa11.67□□□□□ -0.54
SSSCA1-201ENST00000309328 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
SSSCA1-201ENST00000309328 CDKN2A-AS1Q9UH64 79 aa11.67□□□□□ -0.54
SSSCA1-201ENST00000309328 F8VRH5 84 aa11.66□□□□□ -0.54
SSSCA1-201ENST00000309328 S100A6P06703 90 aa11.66□□□□□ -0.54
SSSCA1-201ENST00000309328 FABP4P15090 132 aa11.66□□□□□ -0.54
SSSCA1-201ENST00000309328 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.54
SSSCA1-201ENST00000309328 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
SSSCA1-201ENST00000309328 PRSS2P07478 247 aa11.64□□□□□ -0.55
SSSCA1-201ENST00000309328 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
SSSCA1-201ENST00000309328 PLNP26678 52 aa11.63□□□□□ -0.55
SSSCA1-201ENST00000309328 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
SSSCA1-201ENST00000309328 Q8IZM0 81 aa11.63□□□□□ -0.55
SSSCA1-201ENST00000309328 CARD19Q96LW7 228 aa11.63□□□□□ -0.55
SSSCA1-201ENST00000309328 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
SSSCA1-201ENST00000309328 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
SSSCA1-201ENST00000309328 CXCL5P42830 114 aa11.62□□□□□ -0.55
SSSCA1-201ENST00000309328 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
SSSCA1-201ENST00000309328 NDUFA1O15239 70 aa11.61□□□□□ -0.55
SSSCA1-201ENST00000309328 ODF1Q14990 250 aa11.61□□□□□ -0.55
SSSCA1-201ENST00000309328 RNF151Q2KHN1 245 aa11.61□□□□□ -0.55
SSSCA1-201ENST00000309328 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
SSSCA1-201ENST00000309328 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 S100A2P29034 98 aa11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
SSSCA1-201ENST00000309328 BIRC6Q9NR09 4857 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 H0Y8G0 127 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 SLPIP03973 132 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 AKR1D1P51857 326 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 CKS1BP61024 79 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
SSSCA1-201ENST00000309328 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
SSSCA1-201ENST00000309328 DPM2O94777 84 aa11.58□□□□□ -0.56
SSSCA1-201ENST00000309328 FUSP35637 526 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSSCA1-201ENST00000309328 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
SSSCA1-201ENST00000309328 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
SSSCA1-201ENST00000309328 TRBV30A0A0K0K1B3 111 aa11.57□□□□□ -0.56
SSSCA1-201ENST00000309328 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
SSSCA1-201ENST00000309328 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
SSSCA1-201ENST00000309328 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
SSSCA1-201ENST00000309328 C20orf202A1L168 122 aa11.56□□□□□ -0.56
SSSCA1-201ENST00000309328 SPINK8P0C7L1 97 aa11.56□□□□□ -0.56
SSSCA1-201ENST00000309328 COX7B2Q8TF08 81 aa11.56□□□□□ -0.56
SSSCA1-201ENST00000309328 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
SSSCA1-201ENST00000309328 LINC00474Q9P2X8 69 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms