RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 ATRXP46100 2492 aa13.5□□□□□ -0.25
UBXN2A-201ENST00000309033 SORL1Q92673 2214 aa13.5□□□□□ -0.25
UBXN2A-201ENST00000309033 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
UBXN2A-201ENST00000309033 BRK1Q8WUW1 75 aa13.5□□□□□ -0.25
UBXN2A-201ENST00000309033 CNFNQ9BYD5 112 aa13.5□□□□□ -0.25
UBXN2A-201ENST00000309033 IGIPA6NJ69 53 aa13.49□□□□□ -0.25
UBXN2A-201ENST00000309033 M0R378 163 aa13.49□□□□□ -0.25
UBXN2A-201ENST00000309033 LST1O00453 97 aa13.49□□□□□ -0.25
UBXN2A-201ENST00000309033 UQCRQO14949 82 aa13.49□□□□□ -0.25
UBXN2A-201ENST00000309033 PLA2G2AP14555 144 aa13.49□□□□□ -0.25
UBXN2A-201ENST00000309033 IGHV4-30-4P0DP06 118 aa13.48□□□□□ -0.25
UBXN2A-201ENST00000309033 A0A1W2PPR1 153 aa13.48□□□□□ -0.25
UBXN2A-201ENST00000309033 IGLV4-69A0A075B6H9 119 aa13.48□□□□□ -0.25
UBXN2A-201ENST00000309033 KIR2DL5BQ8NHK3 375 aa13.48□□□□□ -0.25
UBXN2A-201ENST00000309033 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
UBXN2A-201ENST00000309033 RETNQ9HD89 108 aa13.47□□□□□ -0.25
UBXN2A-201ENST00000309033 SEC61GP60059 68 aa13.47□□□□□ -0.25
UBXN2A-201ENST00000309033 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
UBXN2A-201ENST00000309033 USP17L23D6RBM5 183 aa13.46□□□□□ -0.25
UBXN2A-201ENST00000309033 C3orf22Q8N5N4 141 aa13.46□□□□□ -0.25
UBXN2A-201ENST00000309033 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
UBXN2A-201ENST00000309033 SPINK6Q6UWN8 80 aa13.45□□□□□ -0.26
UBXN2A-201ENST00000309033 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
UBXN2A-201ENST00000309033 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
UBXN2A-201ENST00000309033 CASC2Q6XLA1 102 aa13.45□□□□□ -0.26
UBXN2A-201ENST00000309033 LINC00242Q5T6M2 205 aa13.44□□□□□ -0.26
UBXN2A-201ENST00000309033 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
UBXN2A-201ENST00000309033 COX6A2Q02221 97 aa13.44□□□□□ -0.26
UBXN2A-201ENST00000309033 PIEZO2Q9H5I5 2752 aa13.44□□□□□ -0.26
UBXN2A-201ENST00000309033 C9orf116Q5BN46 136 aaPredicted RBP13.43□□□□□ -0.26
UBXN2A-201ENST00000309033 WFDC13Q8IUB5 93 aa13.43□□□□□ -0.26
UBXN2A-201ENST00000309033 RAI1Q7Z5J4 1906 aaPredicted RBP13.43□□□□□ -0.26
UBXN2A-201ENST00000309033 ZNF73O43830 326 aaPredicted RBP13.43□□□□□ -0.26
UBXN2A-201ENST00000309033 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
UBXN2A-201ENST00000309033 Q8IZM0 81 aa13.42□□□□□ -0.26
UBXN2A-201ENST00000309033 DHRS4-AS1Q9P1J3 65 aa13.42□□□□□ -0.26
UBXN2A-201ENST00000309033 LOC107984640A0A0U1RRK4 108 aa13.42□□□□□ -0.26
UBXN2A-201ENST00000309033 C7orf33Q8WU49 177 aa13.42□□□□□ -0.26
UBXN2A-201ENST00000309033 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
UBXN2A-201ENST00000309033 LY6G6CO95867 125 aa13.41□□□□□ -0.26
UBXN2A-201ENST00000309033 LINC00694P0DN24 101 aa13.41□□□□□ -0.26
UBXN2A-201ENST00000309033 COX17Q14061 63 aa13.41□□□□□ -0.26
UBXN2A-201ENST00000309033 UNQ6190/PRO20217Q6UXQ8 127 aa13.41□□□□□ -0.26
UBXN2A-201ENST00000309033 NAV2Q8IVL1 2488 aa13.41□□□□□ -0.26
UBXN2A-201ENST00000309033 SPTSSBQ8NFR3 76 aa13.4□□□□□ -0.26
UBXN2A-201ENST00000309033 IGLV9-49A0A0B4J1Y8 123 aa13.4□□□□□ -0.26
UBXN2A-201ENST00000309033 CPAMD8Q8IZJ3 1885 aa13.4□□□□□ -0.26
UBXN2A-201ENST00000309033 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
UBXN2A-201ENST00000309033 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
UBXN2A-201ENST00000309033 IGLV4-60A0A075B6I1 120 aa13.39□□□□□ -0.27
UBXN2A-201ENST00000309033 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 BRI3O95415 125 aa13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 SVIPQ8NHG7 77 aa13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 ZNF580Q9UK33 172 aa13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 IGF2RP11717 2491 aa13.38□□□□□ -0.27
UBXN2A-201ENST00000309033 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
UBXN2A-201ENST00000309033 XGP55808 180 aa13.37□□□□□ -0.27
UBXN2A-201ENST00000309033 NAV3Q8IVL0 2385 aa13.37□□□□□ -0.27
UBXN2A-201ENST00000309033 IGLV1-51P01701 117 aa13.36□□□□□ -0.27
UBXN2A-201ENST00000309033 CCDC168Q8NDH2 2452 aa13.35□□□□□ -0.27
UBXN2A-201ENST00000309033 Q6ZSN1 163 aa13.35□□□□□ -0.27
UBXN2A-201ENST00000309033 EML5Q05BV3 1969 aa13.35□□□□□ -0.27
UBXN2A-201ENST00000309033 PRR4Q16378 134 aa13.35□□□□□ -0.27
UBXN2A-201ENST00000309033 NCOR2Q9Y618 2525 aa13.35□□□□□ -0.27
UBXN2A-201ENST00000309033 FHL2Q14192 279 aa13.34□□□□□ -0.27
UBXN2A-201ENST00000309033 CCDC179H3BU77 68 aa13.33□□□□□ -0.28
UBXN2A-201ENST00000309033 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
UBXN2A-201ENST00000309033 FAM30AQ9NZY2 134 aa13.33□□□□□ -0.28
UBXN2A-201ENST00000309033 SERP2Q8N6R1 65 aa13.32□□□□□ -0.28
UBXN2A-201ENST00000309033 ZNF706Q9Y5V0 76 aaPredicted RBP13.31□□□□□ -0.28
UBXN2A-201ENST00000309033 A0A087WYN8 130 aa13.31□□□□□ -0.28
UBXN2A-201ENST00000309033 TRBV10-3A0A0K0K1G6 114 aa13.31□□□□□ -0.28
UBXN2A-201ENST00000309033 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.3□□□□□ -0.28
UBXN2A-201ENST00000309033 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
UBXN2A-201ENST00000309033 Q6ZTC4 211 aa13.3□□□□□ -0.28
UBXN2A-201ENST00000309033 FAM19A3Q7Z5A8 133 aa13.3□□□□□ -0.28
UBXN2A-201ENST00000309033 A0A096LNJ9 63 aa13.3□□□□□ -0.28
UBXN2A-201ENST00000309033 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
UBXN2A-201ENST00000309033 M0QXV9 152 aa13.29□□□□□ -0.28
UBXN2A-201ENST00000309033 C6orf223Q8N319 242 aa13.28□□□□□ -0.28
UBXN2A-201ENST00000309033 WDR87Q6ZQQ6 2873 aa13.27□□□□□ -0.28
UBXN2A-201ENST00000309033 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.29
UBXN2A-201ENST00000309033 Q8N814 137 aa13.27□□□□□ -0.29
UBXN2A-201ENST00000309033 IMUPQ9GZP8 106 aa13.27□□□□□ -0.29
UBXN2A-201ENST00000309033 NTM-AS1Q6ZSK4 140 aa13.27□□□□□ -0.29
UBXN2A-201ENST00000309033 C2CD3Q4AC94 2353 aa13.26□□□□□ -0.29
UBXN2A-201ENST00000309033 AMELXQ99217 191 aa13.26□□□□□ -0.29
UBXN2A-201ENST00000309033 CELA1Q9UNI1 258 aa13.25□□□□□ -0.29
UBXN2A-201ENST00000309033 COX8CQ7Z4L0 72 aa13.25□□□□□ -0.29
UBXN2A-201ENST00000309033 A0A0U1RQV1 116 aa13.25□□□□□ -0.29
UBXN2A-201ENST00000309033 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
UBXN2A-201ENST00000309033 EGFEM1PQ0D2K5 195 aa13.25□□□□□ -0.29
UBXN2A-201ENST00000309033 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
UBXN2A-201ENST00000309033 Q6JHZ5 121 aa13.23□□□□□ -0.29
UBXN2A-201ENST00000309033 COX7CP15954 63 aa13.23□□□□□ -0.29
UBXN2A-201ENST00000309033 ADAMTS20P59510 1910 aa13.23□□□□□ -0.29
UBXN2A-201ENST00000309033 LINC00474Q9P2X8 69 aa13.22□□□□□ -0.29
UBXN2A-201ENST00000309033 C10orf25Q5T742 122 aa13.22□□□□□ -0.29
UBXN2A-201ENST00000309033 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms