RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 PRO1854Q9UHT4 67 aa14.08□□□□□ -0.15
SSH3-202ENST00000308298 IGLV4-60A0A075B6I1 120 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 F5H768 121 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 TIMM17BO60830 172 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 MIFP14174 115 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 ADAMTSL4-AS1Q5T5F5 129 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 NBEAL2Q6ZNJ1 2754 aa14.08□□□□□ -0.16
SSH3-202ENST00000308298 MIAQ16674 131 aa14.07□□□□□ -0.16
SSH3-202ENST00000308298 Q8NAQ8 132 aa14.07□□□□□ -0.16
SSH3-202ENST00000308298 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.07□□□□□ -0.16
SSH3-202ENST00000308298 A0A0B4J2C4 111 aa14.07□□□□□ -0.16
SSH3-202ENST00000308298 PAX4O43316 350 aa14.06□□□□□ -0.16
SSH3-202ENST00000308298 H3BMG7 143 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
SSH3-202ENST00000308298 PRSS2P07478 247 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 DAD1P61803 113 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 LYRM7Q5U5X0 104 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 TRRAPQ9Y4A5 3859 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 J3QR89 54 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 KRTAP24-1Q3LI83 254 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 RNF183Q96D59 192 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 Q9H8V8 135 aa14.05□□□□□ -0.16
SSH3-202ENST00000308298 LOC107984156A0A0G2JMH3 177 aa14.04□□□□□ -0.16
SSH3-202ENST00000308298 ARL17AQ8IVW1 177 aa14.04□□□□□ -0.16
SSH3-202ENST00000308298 TEX48A0A1B0GUV7 120 aa14.03□□□□□ -0.16
SSH3-202ENST00000308298 SFTA2Q6UW10 78 aa14.03□□□□□ -0.16
SSH3-202ENST00000308298 CELA1Q9UNI1 258 aa14.03□□□□□ -0.16
SSH3-202ENST00000308298 IGKV3OR2-268A0A0C4DH90 116 aa14.02□□□□□ -0.16
SSH3-202ENST00000308298 IGHV3-33P01772 117 aa14.02□□□□□ -0.17
SSH3-202ENST00000308298 CIRBPQ14011 172 aaKnown RBP14.02□□□□□ -0.17
SSH3-202ENST00000308298 IFITM1P13164 125 aa14.01□□□□□ -0.17
SSH3-202ENST00000308298 A0A096LPF7 62 aa14□□□□□ -0.17
SSH3-202ENST00000308298 ATP5G1P05496 136 aa14□□□□□ -0.17
SSH3-202ENST00000308298 WFDC2Q14508 124 aa14□□□□□ -0.17
SSH3-202ENST00000308298 OXLD1Q5BKU9 147 aa14□□□□□ -0.17
SSH3-202ENST00000308298 ZNF625Q96I27 306 aaPredicted RBP14□□□□□ -0.17
SSH3-202ENST00000308298 SPART-AS1P0CW21 52 aa14□□□□□ -0.17
SSH3-202ENST00000308298 ERG28Q9UKR5 140 aa14□□□□□ -0.17
SSH3-202ENST00000308298 A0A1B0GUV1 79 aa13.99□□□□□ -0.17
SSH3-202ENST00000308298 NPC2P61916 151 aa13.99□□□□□ -0.17
SSH3-202ENST00000308298 PRIMA1Q86XR5 153 aa13.99□□□□□ -0.17
SSH3-202ENST00000308298 TMEM262E9PQX1 116 aa13.98□□□□□ -0.17
SSH3-202ENST00000308298 PSMB2P49721 201 aa13.98□□□□□ -0.17
SSH3-202ENST00000308298 HERV-K104P63124 156 aa13.98□□□□□ -0.17
SSH3-202ENST00000308298 DAND5Q8N907 189 aa13.98□□□□□ -0.17
SSH3-202ENST00000308298 PRO0461Q9UI25 63 aa13.98□□□□□ -0.17
SSH3-202ENST00000308298 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
SSH3-202ENST00000308298 LINC00959A0A1B0GUT2 108 aa13.97□□□□□ -0.17
SSH3-202ENST00000308298 C3orf56Q8N813 242 aa13.97□□□□□ -0.17
SSH3-202ENST00000308298 KRTAP10-11P60412 298 aa13.96□□□□□ -0.17
SSH3-202ENST00000308298 TRBV20-1A0A075B6N2 111 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 CYSRT1A8MQ03 144 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 H7C2G1 150 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 ETDBQ3ZM63 59 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 COX7B2Q8TF08 81 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 BAHCC1Q9P281 2608 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 SCGB1C2P0DMR2 95 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 MEIG1Q5JSS6 88 aa13.95□□□□□ -0.18
SSH3-202ENST00000308298 A0A087WZ39 114 aa13.94□□□□□ -0.18
SSH3-202ENST00000308298 TCL1BO95988 128 aa13.94□□□□□ -0.18
SSH3-202ENST00000308298 Q1RN00 199 aa13.94□□□□□ -0.18
SSH3-202ENST00000308298 MTURNQ8N3F0 131 aa13.94□□□□□ -0.18
SSH3-202ENST00000308298 SHISA2Q6UWI4 295 aa13.93□□□□□ -0.18
SSH3-202ENST00000308298 LINC00308Q8TCZ7 52 aa13.93□□□□□ -0.18
SSH3-202ENST00000308298 EGFEM1PQ0D2K5 195 aa13.93□□□□□ -0.18
SSH3-202ENST00000308298 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
SSH3-202ENST00000308298 HTN3P15516 51 aa13.92□□□□□ -0.18
SSH3-202ENST00000308298 SH2D6Q7Z4S9 175 aa13.92□□□□□ -0.18
SSH3-202ENST00000308298 COPS9Q8WXC6 57 aa13.92□□□□□ -0.18
SSH3-202ENST00000308298 SS18Q15532 418 aa13.91□□□□□ -0.18
SSH3-202ENST00000308298 TOMM7Q9P0U1 55 aa13.91□□□□□ -0.18
SSH3-202ENST00000308298 MRPL23Q16540 153 aaKnown RBP13.9□□□□□ -0.18
SSH3-202ENST00000308298 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
SSH3-202ENST00000308298 TRBV30A0A0K0K1B3 111 aa13.89□□□□□ -0.19
SSH3-202ENST00000308298 CLPSL2Q6UWE3 100 aa13.88□□□□□ -0.19
SSH3-202ENST00000308298 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
SSH3-202ENST00000308298 XCL1P47992 114 aa13.88□□□□□ -0.19
SSH3-202ENST00000308298 SOSTDC1Q6X4U4 206 aa13.88□□□□□ -0.19
SSH3-202ENST00000308298 FBN1P35555 2871 aaKnown RBP13.87□□□□□ -0.19
SSH3-202ENST00000308298 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 TRIAP1O43715 76 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 SMCPP49901 116 aaPredicted RBP13.86□□□□□ -0.19
SSH3-202ENST00000308298 PPDPFQ9H3Y8 114 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 RETNQ9HD89 108 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
SSH3-202ENST00000308298 SIGMAR1Q99720 223 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 SPATA25Q9BR10 227 aa13.86□□□□□ -0.19
SSH3-202ENST00000308298 LINC00269Q8N2A0 174 aa13.85□□□□□ -0.19
SSH3-202ENST00000308298 FOXI1Q12951 378 aa13.84□□□□□ -0.19
SSH3-202ENST00000308298 LELP1Q5T871 98 aa13.84□□□□□ -0.19
SSH3-202ENST00000308298 LINC01561Q8N1V8 128 aa13.84□□□□□ -0.19
SSH3-202ENST00000308298 CMYA5Q8N3K9 4069 aa13.84□□□□□ -0.19
SSH3-202ENST00000308298 ANGP03950 147 aaKnown RBP13.83□□□□□ -0.2
SSH3-202ENST00000308298 Q8N3U1 123 aa13.83□□□□□ -0.2
SSH3-202ENST00000308298 SCGB1A1P11684 91 aa13.82□□□□□ -0.2
SSH3-202ENST00000308298 STAB1Q9NY15 2570 aa13.82□□□□□ -0.2
SSH3-202ENST00000308298 REG3AQ06141 175 aa13.81□□□□□ -0.2
SSH3-202ENST00000308298 ATXN8Q156A1 80 aa13.81□□□□□ -0.2
SSH3-202ENST00000308298 COX6CP09669 75 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms