RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 SPINK8P0C7L1 97 aa8.21□□□□□ -1.1
TRIM40-205ENST00000307859 GCSHP23434 173 aa8.21□□□□□ -1.1
TRIM40-205ENST00000307859 SCGB1D4Q6XE38 83 aa8.21□□□□□ -1.1
TRIM40-205ENST00000307859 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 A6NDN8 102 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 TAX1BP3O14907 124 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 FXYD2P54710 66 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 TM2D3Q9BRN9 247 aa8.2□□□□□ -1.1
TRIM40-205ENST00000307859 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
TRIM40-205ENST00000307859 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
TRIM40-205ENST00000307859 RBX1P62877 108 aa8.19□□□□□ -1.1
TRIM40-205ENST00000307859 HIST1H4GQ99525 98 aa8.19□□□□□ -1.1
TRIM40-205ENST00000307859 COX11Q9Y6N1 276 aa8.19□□□□□ -1.1
TRIM40-205ENST00000307859 ZFAND6Q6FIF0 208 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 Q6ZTC4 211 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 LELP1Q5T871 98 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 Q6ZVH6 145 aa8.18□□□□□ -1.1
TRIM40-205ENST00000307859 K7EP13 123 aa8.17□□□□□ -1.1
TRIM40-205ENST00000307859 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
TRIM40-205ENST00000307859 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
TRIM40-205ENST00000307859 DYNC2H1Q8NCM8 4307 aaKnown RBP8.16□□□□□ -1.1
TRIM40-205ENST00000307859 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
TRIM40-205ENST00000307859 LINC00959A0A1B0GUT2 108 aa8.16□□□□□ -1.1
TRIM40-205ENST00000307859 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
TRIM40-205ENST00000307859 HUWE1Q7Z6Z7 4374 aaKnown RBP8.16□□□□□ -1.1
TRIM40-205ENST00000307859 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
TRIM40-205ENST00000307859 NDUFA1O15239 70 aa8.15□□□□□ -1.1
TRIM40-205ENST00000307859 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
TRIM40-205ENST00000307859 IGKV3OR2-268A0A0C4DH90 116 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 CCL25O15444 150 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 NANOS2P60321 138 aaKnown RBP8.14□□□□□ -1.11
TRIM40-205ENST00000307859 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRIM40-205ENST00000307859 DEFB121Q5J5C9 76 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 LYPD5Q6UWN5 251 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 SMIM13P0DJ93 91 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 LITAFQ99732 161 aa8.14□□□□□ -1.11
TRIM40-205ENST00000307859 NHP2Q9NX24 153 aaKnown RBP8.14□□□□□ -1.11
TRIM40-205ENST00000307859 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
TRIM40-205ENST00000307859 A0A087WZ39 114 aa8.13□□□□□ -1.11
TRIM40-205ENST00000307859 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
TRIM40-205ENST00000307859 LCE6AA0A183 80 aa8.13□□□□□ -1.11
TRIM40-205ENST00000307859 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
TRIM40-205ENST00000307859 SS18Q15532 418 aa8.13□□□□□ -1.11
TRIM40-205ENST00000307859 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 A6NJY4 79 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 TIMM17BO60830 172 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 Q8N3U1 123 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
TRIM40-205ENST00000307859 K7ERJ3 54 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 LINC00269Q8N2A0 174 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
TRIM40-205ENST00000307859 SPANXDQ9BXN6 97 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 SPANXCQ9NY87 97 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
TRIM40-205ENST00000307859 REG3AQ06141 175 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 Q9H8V8 135 aa8.11□□□□□ -1.11
TRIM40-205ENST00000307859 TRAV10A0A0B4J240 114 aa8.1□□□□□ -1.11
TRIM40-205ENST00000307859 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
TRIM40-205ENST00000307859 RAB37Q96AX2 223 aa8.1□□□□□ -1.11
TRIM40-205ENST00000307859 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 XCL1P47992 114 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 HERV-K104P63124 156 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 PRR34Q9NV39 138 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
TRIM40-205ENST00000307859 H3BUT2 72 aa8.08□□□□□ -1.12
TRIM40-205ENST00000307859 MIAQ16674 131 aa8.08□□□□□ -1.12
TRIM40-205ENST00000307859 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
TRIM40-205ENST00000307859 C5orf38Q86SI9 138 aa8.08□□□□□ -1.12
TRIM40-205ENST00000307859 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
TRIM40-205ENST00000307859 VAMP3Q15836 100 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 ESRGQ1W209 222 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 MUSTN1Q8IVN3 82 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 MUC7Q8TAX7 377 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
TRIM40-205ENST00000307859 WFDC10BQ8IUB3 73 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 C15orf53Q8NAA6 179 aa8.07□□□□□ -1.12
TRIM40-205ENST00000307859 A0A1W2PPM0 123 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 A4D1N5 150 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 IGLL5B9A064 214 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 CFC1P0CG37 223 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 UBE2V1Q13404 147 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
TRIM40-205ENST00000307859 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
TRIM40-205ENST00000307859 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
TRIM40-205ENST00000307859 COX7A2LO14548 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms