RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
CCDC8-201ENST00000307522 SOCS3O14543 225 aa11.76□□□□□ -0.53
CCDC8-201ENST00000307522 CIRBPQ14011 172 aaKnown RBP11.76□□□□□ -0.53
CCDC8-201ENST00000307522 C22orf24Q9Y442 160 aa11.76□□□□□ -0.53
CCDC8-201ENST00000307522 HIST1H4AP62805 103 aaKnown RBP11.75□□□□□ -0.53
CCDC8-201ENST00000307522 SPANXDQ9BXN6 97 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 SPANXCQ9NY87 97 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 ATP5G1P05496 136 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 FAM223AQ8IWN6 122 aa11.75□□□□□ -0.53
CCDC8-201ENST00000307522 HIVEP1P15822 2718 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 A0A0J9YX75 114 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 COX6A2Q02221 97 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 C19orf54Q5BKX5 351 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 LINC00308Q8TCZ7 52 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 COX7A2LO14548 114 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 HILS1P60008 231 aa11.74□□□□□ -0.53
CCDC8-201ENST00000307522 SLPIP03973 132 aa11.73□□□□□ -0.53
CCDC8-201ENST00000307522 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
CCDC8-201ENST00000307522 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
CCDC8-201ENST00000307522 ACYP1P07311 99 aa11.72□□□□□ -0.53
CCDC8-201ENST00000307522 DNAL4O96015 105 aa11.71□□□□□ -0.53
CCDC8-201ENST00000307522 CRYGAP11844 174 aa11.71□□□□□ -0.53
CCDC8-201ENST00000307522 DSCR9P59020 149 aa11.71□□□□□ -0.53
CCDC8-201ENST00000307522 Q6ZSN1 163 aa11.71□□□□□ -0.53
CCDC8-201ENST00000307522 LINC00467Q9BRT7 94 aa11.71□□□□□ -0.53
CCDC8-201ENST00000307522 IGLV1-40P01703 118 aa11.71□□□□□ -0.54
CCDC8-201ENST00000307522 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.54
CCDC8-201ENST00000307522 LINC00846Q9NV44 126 aa11.71□□□□□ -0.54
CCDC8-201ENST00000307522 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
CCDC8-201ENST00000307522 NDUFA4O00483 81 aa11.7□□□□□ -0.54
CCDC8-201ENST00000307522 PSMB8P28062 276 aa11.7□□□□□ -0.54
CCDC8-201ENST00000307522 KLLNB2CW77 178 aa11.7□□□□□ -0.54
CCDC8-201ENST00000307522 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
CCDC8-201ENST00000307522 NCR3O14931 201 aa11.69□□□□□ -0.54
CCDC8-201ENST00000307522 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
CCDC8-201ENST00000307522 ATOX1O00244 68 aa11.69□□□□□ -0.54
CCDC8-201ENST00000307522 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
CCDC8-201ENST00000307522 USMG5Q96IX5 58 aa11.69□□□□□ -0.54
CCDC8-201ENST00000307522 F8P00451 2351 aa11.68□□□□□ -0.54
CCDC8-201ENST00000307522 A0A087WYN8 130 aa11.68□□□□□ -0.54
CCDC8-201ENST00000307522 PRIMA1Q86XR5 153 aa11.68□□□□□ -0.54
CCDC8-201ENST00000307522 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 Q6YL49 198 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 TRAV23DV6A0A075B6W5 121 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 FHL2Q14192 279 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 Q5XG85 94 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 J3QKU1 62 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 LINC01561Q8N1V8 128 aa11.67□□□□□ -0.54
CCDC8-201ENST00000307522 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
CCDC8-201ENST00000307522 MALP21145 153 aa11.66□□□□□ -0.54
CCDC8-201ENST00000307522 BEAN1Q3B7T3 259 aa11.66□□□□□ -0.54
CCDC8-201ENST00000307522 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
CCDC8-201ENST00000307522 CFHR3Q02985 330 aa11.65□□□□□ -0.54
CCDC8-201ENST00000307522 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
CCDC8-201ENST00000307522 TRRAPQ9Y4A5 3859 aa11.65□□□□□ -0.54
CCDC8-201ENST00000307522 C9orf85Q96MD7 179 aa11.65□□□□□ -0.54
CCDC8-201ENST00000307522 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
CCDC8-201ENST00000307522 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
CCDC8-201ENST00000307522 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
CCDC8-201ENST00000307522 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
CCDC8-201ENST00000307522 UBE2D4Q9Y2X8 147 aa11.64□□□□□ -0.55
CCDC8-201ENST00000307522 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
CCDC8-201ENST00000307522 NSD1Q96L73 2696 aaPredicted RBP11.63□□□□□ -0.55
CCDC8-201ENST00000307522 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
CCDC8-201ENST00000307522 SERP2Q8N6R1 65 aa11.63□□□□□ -0.55
CCDC8-201ENST00000307522 CHCHD7Q9BUK0 85 aa11.62□□□□□ -0.55
CCDC8-201ENST00000307522 RBMY1A1P0DJD3 496 aaKnown RBP11.62□□□□□ -0.55
CCDC8-201ENST00000307522 RBMY1CP0DJD4 496 aa11.62□□□□□ -0.55
CCDC8-201ENST00000307522 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
CCDC8-201ENST00000307522 DNAJC9-AS1A6NH13 148 aa11.62□□□□□ -0.55
CCDC8-201ENST00000307522 C20orf197Q8N268 126 aa11.62□□□□□ -0.55
CCDC8-201ENST00000307522 CXCL5P42830 114 aa11.61□□□□□ -0.55
CCDC8-201ENST00000307522 DEFB131AP59861 70 aa11.61□□□□□ -0.55
CCDC8-201ENST00000307522 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
CCDC8-201ENST00000307522 NDUFA1O15239 70 aa11.61□□□□□ -0.55
CCDC8-201ENST00000307522 TMEM258P61165 79 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 FAM19A1Q7Z5A9 133 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 ANK3Q12955 4377 aaKnown RBP11.6□□□□□ -0.55
CCDC8-201ENST00000307522 LECT2O14960 151 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 LINC00337Q8N6G1 96 aa11.6□□□□□ -0.55
CCDC8-201ENST00000307522 J3QLI3 93 aa11.59□□□□□ -0.55
CCDC8-201ENST00000307522 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
CCDC8-201ENST00000307522 RPS28P62857 69 aaKnown RBP11.59□□□□□ -0.55
CCDC8-201ENST00000307522 STAB1Q9NY15 2570 aa11.58□□□□□ -0.55
CCDC8-201ENST00000307522 MAST4O15021 2626 aa11.58□□□□□ -0.56
CCDC8-201ENST00000307522 GHRHP01286 108 aa11.58□□□□□ -0.56
CCDC8-201ENST00000307522 RPL28P46779 137 aaKnown RBP11.58□□□□□ -0.56
CCDC8-201ENST00000307522 LINC00336Q6ZUF6 198 aa11.58□□□□□ -0.56
CCDC8-201ENST00000307522 WFDC10AQ9H1F0 79 aa11.57□□□□□ -0.56
CCDC8-201ENST00000307522 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
CCDC8-201ENST00000307522 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
CCDC8-201ENST00000307522 CRPP02741 224 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms