RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 ATOX1O00244 68 aa7.41□□□□□ -1.22
PRPF8-201ENST00000304992 IGLV2-11P01706 119 aa7.41□□□□□ -1.22
PRPF8-201ENST00000304992 SPANXB1Q9NS25 103 aaPredicted RBP7.41□□□□□ -1.22
PRPF8-201ENST00000304992 ODF3L2Q3SX64 289 aa7.41□□□□□ -1.22
PRPF8-201ENST00000304992 UPK3BQ9BT76 320 aa7.41□□□□□ -1.22
PRPF8-201ENST00000304992 SPTBN4Q9H254 2564 aa7.41□□□□□ -1.22
PRPF8-201ENST00000304992 KLLNB2CW77 178 aa7.4□□□□□ -1.22
PRPF8-201ENST00000304992 PDE6GP18545 87 aa7.4□□□□□ -1.22
PRPF8-201ENST00000304992 CEP295Q9C0D2 2601 aa7.4□□□□□ -1.22
PRPF8-201ENST00000304992 USP9XQ93008 2570 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-201ENST00000304992 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.22
PRPF8-201ENST00000304992 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
PRPF8-201ENST00000304992 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.23
PRPF8-201ENST00000304992 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.23
PRPF8-201ENST00000304992 Q6ZTC4 211 aa7.4□□□□□ -1.23
PRPF8-201ENST00000304992 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.23
PRPF8-201ENST00000304992 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
PRPF8-201ENST00000304992 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
PRPF8-201ENST00000304992 CCKP06307 115 aa7.39□□□□□ -1.23
PRPF8-201ENST00000304992 COL5A1P20908 1838 aaPredicted RBP7.39□□□□□ -1.23
PRPF8-201ENST00000304992 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
PRPF8-201ENST00000304992 TEX49A0A1B0GTD5 131 aa7.38□□□□□ -1.23
PRPF8-201ENST00000304992 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
PRPF8-201ENST00000304992 USP17L23D6RBM5 183 aa7.38□□□□□ -1.23
PRPF8-201ENST00000304992 MUC4Q99102 2169 aa7.38□□□□□ -1.23
PRPF8-201ENST00000304992 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
PRPF8-201ENST00000304992 ATG2AQ2TAZ0 1938 aa7.37□□□□□ -1.23
PRPF8-201ENST00000304992 NRACQ8N912 160 aa7.37□□□□□ -1.23
PRPF8-201ENST00000304992 IGLV1-51P01701 117 aa7.37□□□□□ -1.23
PRPF8-201ENST00000304992 M0R378 163 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 Q6ZQY7 126 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 TRIAP1O43715 76 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 CYSRT1A8MQ03 144 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 EML5Q05BV3 1969 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
PRPF8-201ENST00000304992 U3KQK5 164 aa7.36□□□□□ -1.23
PRPF8-201ENST00000304992 ENHOQ6UWT2 76 aa7.35□□□□□ -1.23
PRPF8-201ENST00000304992 UBE2D2P62837 147 aa7.35□□□□□ -1.23
PRPF8-201ENST00000304992 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
PRPF8-201ENST00000304992 AGRNO00468 2067 aa7.35□□□□□ -1.23
PRPF8-201ENST00000304992 C9orf116Q5BN46 136 aaPredicted RBP7.35□□□□□ -1.23
PRPF8-201ENST00000304992 FASNP49327 2511 aaKnown RBP7.34□□□□□ -1.23
PRPF8-201ENST00000304992 WFDC13Q8IUB5 93 aa7.34□□□□□ -1.23
PRPF8-201ENST00000304992 G3V4G9 280 aa7.34□□□□□ -1.23
PRPF8-201ENST00000304992 M0QXV9 152 aa7.34□□□□□ -1.23
PRPF8-201ENST00000304992 CRIP2P52943 208 aaPredicted RBP7.34□□□□□ -1.24
PRPF8-201ENST00000304992 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.24
PRPF8-201ENST00000304992 C6orf223Q8N319 242 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 LINC00474Q9P2X8 69 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 CDC42SE2Q9NRR3 84 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 CPAMD8Q8IZJ3 1885 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 ADAMTS20P59510 1910 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
PRPF8-201ENST00000304992 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
PRPF8-201ENST00000304992 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
PRPF8-201ENST00000304992 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
PRPF8-201ENST00000304992 C10orf142B7Z368 130 aa7.32□□□□□ -1.24
PRPF8-201ENST00000304992 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
PRPF8-201ENST00000304992 USP9YO00507 2555 aaPredicted RBP7.32□□□□□ -1.24
PRPF8-201ENST00000304992 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
PRPF8-201ENST00000304992 RNASE8Q8TDE3 154 aaKnown RBP7.32□□□□□ -1.24
PRPF8-201ENST00000304992 C16orf95Q9H693 158 aa7.31□□□□□ -1.24
PRPF8-201ENST00000304992 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
PRPF8-201ENST00000304992 ZNF73O43830 326 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-201ENST00000304992 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
PRPF8-201ENST00000304992 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
PRPF8-201ENST00000304992 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
PRPF8-201ENST00000304992 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
PRPF8-201ENST00000304992 C1orf134Q5TEV5 83 aa7.3□□□□□ -1.24
PRPF8-201ENST00000304992 Q8IZM0 81 aa7.29□□□□□ -1.24
PRPF8-201ENST00000304992 FHL2Q14192 279 aa7.29□□□□□ -1.24
PRPF8-201ENST00000304992 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
PRPF8-201ENST00000304992 LINC00694P0DN24 101 aa7.29□□□□□ -1.24
PRPF8-201ENST00000304992 PRR3P79522 188 aaKnown RBP7.28□□□□□ -1.24
PRPF8-201ENST00000304992 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
PRPF8-201ENST00000304992 POLQO75417 2590 aa7.28□□□□□ -1.24
PRPF8-201ENST00000304992 PKD1L2Q7Z442 2459 aa7.28□□□□□ -1.24
PRPF8-201ENST00000304992 TRBV30A0A0K0K1B3 111 aa7.27□□□□□ -1.24
PRPF8-201ENST00000304992 COX6A2Q02221 97 aa7.27□□□□□ -1.24
PRPF8-201ENST00000304992 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.24
PRPF8-201ENST00000304992 COX17Q14061 63 aa7.27□□□□□ -1.25
PRPF8-201ENST00000304992 LINC00242Q5T6M2 205 aa7.27□□□□□ -1.25
PRPF8-201ENST00000304992 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
PRPF8-201ENST00000304992 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
PRPF8-201ENST00000304992 MRPS12O15235 138 aaKnown RBP7.26□□□□□ -1.25
PRPF8-201ENST00000304992 MTORP42345 2549 aa7.26□□□□□ -1.25
PRPF8-201ENST00000304992 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
PRPF8-201ENST00000304992 PRR4Q16378 134 aa7.26□□□□□ -1.25
PRPF8-201ENST00000304992 TIMM17BO60830 172 aa7.26□□□□□ -1.25
PRPF8-201ENST00000304992 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
PRPF8-201ENST00000304992 MT-ATP8P03928 68 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 FSHBP01225 129 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 TRBV10-3A0A0K0K1G6 114 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 Q6ZSN1 163 aa7.25□□□□□ -1.25
PRPF8-201ENST00000304992 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
PRPF8-201ENST00000304992 CHCHD7Q9BUK0 85 aa7.24□□□□□ -1.25
PRPF8-201ENST00000304992 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms