RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 BRWD1-AS2P59051 145 aa4.09□□□□□ -1.75
ZNF440-201ENST00000304060 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
ZNF440-201ENST00000304060 MIR17HGQ75NE6 70 aa4.09□□□□□ -1.75
ZNF440-201ENST00000304060 RPP21Q9H633 154 aaKnown RBP4.09□□□□□ -1.75
ZNF440-201ENST00000304060 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.76
ZNF440-201ENST00000304060 GYPEP15421 78 aa4.09□□□□□ -1.76
ZNF440-201ENST00000304060 TMEM170BQ5T4T1 132 aa4.09□□□□□ -1.76
ZNF440-201ENST00000304060 FAM167A-AS1Q96KT0 104 aa4.09□□□□□ -1.76
ZNF440-201ENST00000304060 C8orf49Q96NF6 230 aa4.09□□□□□ -1.76
ZNF440-201ENST00000304060 IGKV2D-26A0A0A0MRZ7 120 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 TRAV8-3A0A0A6YYJ7 113 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 HIGD1CA8MV81 97 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 K7ERJ3 54 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 HBDP02042 147 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 PGLYRP4Q96LB8 373 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 LINC00467Q9BRT7 94 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 Q9HAA7 133 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 EPDR1Q9UM22 224 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 AGRNO00468 2067 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 IGKV2D-24A0A075B6R9 120 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
ZNF440-201ENST00000304060 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 E7EUB6 86 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
ZNF440-201ENST00000304060 PYYP10082 97 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 TWIST1Q15672 202 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 MORN5Q5VZ52 161 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 CSNK1G2-AS1Q8NCQ2 148 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
ZNF440-201ENST00000304060 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 TRBV19A0A075B6N1 114 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 A0A087WTM6 91 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 K7EMI3 77 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 ATP5LO75964 103 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 SMR3BP02814 79 aaPredicted RBP4.07□□□□□ -1.76
ZNF440-201ENST00000304060 PRSS2P07478 247 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 RNF182Q8N6D2 247 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
ZNF440-201ENST00000304060 C9orf85Q96MD7 179 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 CNFNQ9BYD5 112 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 NHP2Q9NX24 153 aaKnown RBP4.07□□□□□ -1.76
ZNF440-201ENST00000304060 SVEP1Q4LDE5 3571 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 RBAKDNA6NC62 111 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 F6UB75 175 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 M0R3E3 92 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 IGFL4Q6B9Z1 124 aa4.07□□□□□ -1.76
ZNF440-201ENST00000304060 TCL1BO95988 128 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 Q6ZQT7 251 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 EXOC3-AS1Q8N2X6 119 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 IGKV1OR2-108A0A075B7D4 117 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 SRSF9Q13242 221 aaKnown RBP eCLIP4.06□□□□□ -1.76
ZNF440-201ENST00000304060 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 GNG5P63218 68 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 TINCRA0A1B0GVN0 87 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 H3BT86 120 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 H3BVH4 76 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 SCGB1C2P0DMR2 95 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 SS18Q15532 418 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 UBE2WQ96B02 151 aa4.06□□□□□ -1.76
ZNF440-201ENST00000304060 IGKCP01834 107 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 A0A0B4J2C4 111 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
ZNF440-201ENST00000304060 TCRAP04437 139 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 A0A096LPF7 62 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 JPT2Q9H910 190 aa4.05□□□□□ -1.76
ZNF440-201ENST00000304060 TRBV10-2A0A0K0K1G8 114 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 BCE1O60756 84 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 ANGP03950 147 aaKnown RBP4.04□□□□□ -1.76
ZNF440-201ENST00000304060 VPREB1P12018 145 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 PLNP26678 52 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 ANXA2RQ3ZCQ2 193 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 Q8TAT8 98 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 DAZ2Q13117 558 aaKnown RBP4.04□□□□□ -1.76
ZNF440-201ENST00000304060 ERCC8Q13216 396 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 ESRGQ1W209 222 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 TMEM243Q9BU79 118 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 PYGO1Q9Y3Y4 419 aa4.04□□□□□ -1.76
ZNF440-201ENST00000304060 IGHV3-73A0A0B4J1V6 119 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 IGHV3-38A0A0C4DH36 116 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 SLC25A20O43772 301 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 DPM2O94777 84 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 PRSS1P07477 247 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 GIG44P09565 113 aaPredicted RBP4.03□□□□□ -1.76
ZNF440-201ENST00000304060 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
ZNF440-201ENST00000304060 ALMS1Q8TCU4 4167 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 IGLV2-11P01706 119 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 FXYD5Q96DB9 178 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 TRAV8-4A0A0B4J246 113 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 LINC01549A6NIU2 74 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 ATOX1O00244 68 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 CKS2P33552 79 aa4.03□□□□□ -1.76
ZNF440-201ENST00000304060 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.77
ZNF440-201ENST00000304060 ARMS2P0C7Q2 107 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms