RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LELP1Q5T871 98 aa5.64□□□□□ -1.51
SF3B3-201ENST00000302516 SNURFQ9Y675 71 aa5.64□□□□□ -1.51
SF3B3-201ENST00000302516 C1orf229Q6ZS94 237 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-201ENST00000302516 C1orf158Q8N1D5 194 aa5.64□□□□□ -1.51
SF3B3-201ENST00000302516 DEFB4AO15263 64 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 Q8N9L7 120 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 C3orf84H3BNL1 204 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 IGLV4-69A0A075B6H9 119 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 LINC00694P0DN24 101 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 COX8CQ7Z4L0 72 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 PSMG3-AS1Q96PY0 264 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 WDR87Q6ZQQ6 2873 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 ZNF462Q96JM2 2506 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 USP9XQ93008 2570 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-201ENST00000302516 MUC4Q99102 2169 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 IGIPA6NJ69 53 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 Q8NA96 180 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 Q6ZQY7 126 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
SF3B3-201ENST00000302516 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
SF3B3-201ENST00000302516 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 A0A087WZ39 114 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 IGHV4-31P0DP07 118 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 Q8N814 137 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 A0A1W2PNU3 283 aaPredicted RBP5.62□□□□□ -1.51
SF3B3-201ENST00000302516 DEFB131BA0A096LNP1 70 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 C11orf71Q6IPW1 123 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 Q8N976 141 aa5.62□□□□□ -1.51
SF3B3-201ENST00000302516 CSDC2Q9Y534 153 aaKnown RBP5.62□□□□□ -1.51
SF3B3-201ENST00000302516 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 CHCHD7Q9BUK0 85 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 LINC00959A0A1B0GUT2 108 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
SF3B3-201ENST00000302516 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 TRAV10A0A0B4J240 114 aa5.61□□□□□ -1.51
SF3B3-201ENST00000302516 ANKRD11Q6UB99 2663 aaPredicted RBP5.6□□□□□ -1.51
SF3B3-201ENST00000302516 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 PRYO14603 147 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 LINC00310P59036 64 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 PRR9Q5T870 116 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 Q6ZS46 218 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 LINC01561Q8N1V8 128 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 ZNF580Q9UK33 172 aa5.6□□□□□ -1.51
SF3B3-201ENST00000302516 LINC01546A6NGU7 62 aa5.59□□□□□ -1.51
SF3B3-201ENST00000302516 BRI3O95415 125 aa5.59□□□□□ -1.51
SF3B3-201ENST00000302516 WFDC11Q8NEX6 87 aa5.59□□□□□ -1.51
SF3B3-201ENST00000302516 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.52
SF3B3-201ENST00000302516 CXCL6P80162 114 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 AMELXQ99217 191 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 ABCA2Q9BZC7 2435 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 WFDC10AQ9H1F0 79 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 C11orf21Q9P2W6 132 aa5.58□□□□□ -1.52
SF3B3-201ENST00000302516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-201ENST00000302516 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 ZNF702PQ9H963 129 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 IGKV2-28A0A075B6P5 120 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 IGKV2D-28P01615 120 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 CRIP2P52943 208 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-201ENST00000302516 POM121L12Q8N7R1 296 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 PKD1L2Q7Z442 2459 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
SF3B3-201ENST00000302516 SMIM1B2RUZ4 78 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 FAM30AQ9NZY2 134 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 TRBV10-3A0A0K0K1G6 114 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 TLN1Q9Y490 2541 aaKnown RBP5.56□□□□□ -1.52
SF3B3-201ENST00000302516 PROK1P58294 105 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 LINC00242Q5T6M2 205 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 KPRPQ5T749 579 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-201ENST00000302516 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-201ENST00000302516 PIEZO2Q9H5I5 2752 aa5.56□□□□□ -1.52
SF3B3-201ENST00000302516 NRGNQ92686 78 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 C22orf34Q6ZV56 151 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 Q6ZSV7 163 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 A8MZ25 164 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 SHISA2Q6UWI4 295 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
SF3B3-201ENST00000302516 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 A0A1B0GUV1 79 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 A0A1B0GW54 56 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 CYSRT1A8MQ03 144 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 BCE1O60756 84 aa5.54□□□□□ -1.52
SF3B3-201ENST00000302516 TLN2Q9Y4G6 2542 aa5.53□□□□□ -1.52
SF3B3-201ENST00000302516 A0A087WYN8 130 aa5.53□□□□□ -1.52
SF3B3-201ENST00000302516 PLAC8L1A1L4L8 177 aa5.53□□□□□ -1.52
SF3B3-201ENST00000302516 PLA2G5P39877 138 aa5.53□□□□□ -1.52
SF3B3-201ENST00000302516 IGLV2-18A0A075B6J9 118 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 C2orf48Q96LS8 159 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 ANKRD17O75179 2603 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms