RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 IGSF10Q6WRI0 2623 aa10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1A1P0DJD3 496 aaKnown RBP10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1CP0DJD4 496 aa10.4□□□□□ -0.74
CDT1-201ENST00000301019 GNLYP22749 145 aa10.4□□□□□ -0.74
CDT1-201ENST00000301019 RBMY1FQ15415 496 aaKnown RBP10.4□□□□□ -0.74
CDT1-201ENST00000301019 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
CDT1-201ENST00000301019 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
CDT1-201ENST00000301019 C19orf84I3L1E1 186 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 NDUFA1O15239 70 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 PAX4O43316 350 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 MED14OSP0DP75 135 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 Q6ZTI0 123 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 CFAP46Q8IYW2 2715 aa10.38□□□□□ -0.75
CDT1-201ENST00000301019 RMI2Q96E14 147 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 KHDC1LQ5JSQ8 128 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 HIST2H2BCQ6DN03 193 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 PRR3P79522 188 aaKnown RBP10.37□□□□□ -0.75
CDT1-201ENST00000301019 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
CDT1-201ENST00000301019 SS18Q15532 418 aa10.36□□□□□ -0.75
CDT1-201ENST00000301019 LINC00242Q5T6M2 205 aa10.36□□□□□ -0.75
CDT1-201ENST00000301019 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
CDT1-201ENST00000301019 CHD6Q8TD26 2715 aa10.35□□□□□ -0.75
CDT1-201ENST00000301019 C5orf56Q8N8D9 126 aa10.35□□□□□ -0.75
CDT1-201ENST00000301019 XCL1P47992 114 aa10.35□□□□□ -0.75
CDT1-201ENST00000301019 RBM3P98179 157 aaKnown RBP10.35□□□□□ -0.75
CDT1-201ENST00000301019 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
CDT1-201ENST00000301019 HAMPP81172 84 aa10.34□□□□□ -0.75
CDT1-201ENST00000301019 NDUFA4O00483 81 aa10.33□□□□□ -0.76
CDT1-201ENST00000301019 BBC3Q96PG8 261 aaPredicted RBP10.33□□□□□ -0.76
CDT1-201ENST00000301019 EPG5Q9HCE0 2579 aa10.33□□□□□ -0.76
CDT1-201ENST00000301019 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
CDT1-201ENST00000301019 IGKV2-28A0A075B6P5 120 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 AVPP01185 164 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 IGKV2D-28P01615 120 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 PRO0628Q9UI54 55 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
CDT1-201ENST00000301019 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
CDT1-201ENST00000301019 Q6JHZ5 121 aa10.31□□□□□ -0.76
CDT1-201ENST00000301019 Q96MF0 132 aa10.31□□□□□ -0.76
CDT1-201ENST00000301019 PRB2P02812 416 aaPredicted RBP10.31□□□□□ -0.76
CDT1-201ENST00000301019 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
CDT1-201ENST00000301019 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
CDT1-201ENST00000301019 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
CDT1-201ENST00000301019 F8WEM9 126 aa10.3□□□□□ -0.76
CDT1-201ENST00000301019 C11orf72Q8NBR9 251 aa10.3□□□□□ -0.76
CDT1-201ENST00000301019 SNRPD3P62318 126 aaKnown RBP10.29□□□□□ -0.76
CDT1-201ENST00000301019 A8MTW9 85 aa10.29□□□□□ -0.76
CDT1-201ENST00000301019 H3BUX3 64 aa10.29□□□□□ -0.76
CDT1-201ENST00000301019 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
CDT1-201ENST00000301019 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 NF1P21359 2839 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 APCP25054 2843 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 PSMB8P28062 276 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 FP248Q71RG6 208 aaPredicted RBP10.28□□□□□ -0.76
CDT1-201ENST00000301019 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
CDT1-201ENST00000301019 DEFB131AP59861 70 aa10.27□□□□□ -0.77
CDT1-201ENST00000301019 M0R2N4 97 aa10.27□□□□□ -0.77
CDT1-201ENST00000301019 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
CDT1-201ENST00000301019 TIMM17BO60830 172 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 CCL18P55774 89 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 DEFB136Q30KP8 78 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 MOB4Q9Y3A3 225 aa10.26□□□□□ -0.77
CDT1-201ENST00000301019 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
CDT1-201ENST00000301019 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
CDT1-201ENST00000301019 UTP20O75691 2785 aaKnown RBP10.25□□□□□ -0.77
CDT1-201ENST00000301019 H7BZZ5 65 aa10.25□□□□□ -0.77
CDT1-201ENST00000301019 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
CDT1-201ENST00000301019 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
CDT1-201ENST00000301019 SEC61GP60059 68 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 DAD1P61803 113 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 IGHV4-38-2P0DP08 117 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 TRGV1A0A0A0MS02 117 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 A0A1W2PPR1 153 aa10.24□□□□□ -0.77
CDT1-201ENST00000301019 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
CDT1-201ENST00000301019 FLNCQ14315 2725 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 IL17DQ8TAD2 202 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 LRRK2Q5S007 2527 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
CDT1-201ENST00000301019 C1orf195Q5TG92 126 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 NDUFC2O95298 119 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 MXRA5Q9NR99 2828 aa10.22□□□□□ -0.77
CDT1-201ENST00000301019 NBPF19A0A087WUL8 3843 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms