RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 G3V4G9 280 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 PAX4O43316 350 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 IGHV3-30P01768 117 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 C10orf126Q8N4M7 172 aa6.4□□□□□ -1.38
PDPN-201ENST00000294489 K7EP34 96 aa6.4□□□□□ -1.39
PDPN-201ENST00000294489 K7ERU9 68 aa6.4□□□□□ -1.39
PDPN-201ENST00000294489 COX6A2Q02221 97 aa6.4□□□□□ -1.39
PDPN-201ENST00000294489 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.39
PDPN-201ENST00000294489 IGLL5B9A064 214 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 SPART-AS1P0CW21 52 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 ZFAND6Q6FIF0 208 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 SS18L2Q9UHA2 77 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 MAST4O15021 2626 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 ATP5G1P05496 136 aa6.39□□□□□ -1.39
PDPN-201ENST00000294489 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
PDPN-201ENST00000294489 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
PDPN-201ENST00000294489 APOMO95445 188 aa6.38□□□□□ -1.39
PDPN-201ENST00000294489 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 CKS1BP61024 79 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 C11orf68Q9H3H3 251 aaKnown RBP6.37□□□□□ -1.39
PDPN-201ENST00000294489 CELA1Q9UNI1 258 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 TMEM262E9PQX1 116 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
PDPN-201ENST00000294489 IGLV4-60A0A075B6I1 120 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 NDUFA1O15239 70 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 A0A096LPF7 62 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 IGKV3OR2-268A0A0C4DH90 116 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 F5H768 121 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 PRSS2P07478 247 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
PDPN-201ENST00000294489 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 MDFIQ99750 246 aa6.36□□□□□ -1.39
PDPN-201ENST00000294489 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
PDPN-201ENST00000294489 TIMM17BO60830 172 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 CFC1P0CG37 223 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 LITAFQ99732 161 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 SPANXDQ9BXN6 97 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 SPANXCQ9NY87 97 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 Q9H8V8 135 aa6.35□□□□□ -1.39
PDPN-201ENST00000294489 HTN3P15516 51 aa6.34□□□□□ -1.39
PDPN-201ENST00000294489 MIAQ16674 131 aa6.34□□□□□ -1.39
PDPN-201ENST00000294489 PRO1854Q9UHT4 67 aa6.34□□□□□ -1.39
PDPN-201ENST00000294489 MRPL23Q16540 153 aaKnown RBP6.34□□□□□ -1.39
PDPN-201ENST00000294489 LYRM7Q5U5X0 104 aa6.34□□□□□ -1.4
PDPN-201ENST00000294489 SH2D6Q7Z4S9 175 aa6.34□□□□□ -1.4
PDPN-201ENST00000294489 A0A0B4J2C4 111 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 TSPAN13O95857 204 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 IFITM1P13164 125 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 RETNQ9HD89 108 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 SS18Q15532 418 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
PDPN-201ENST00000294489 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 K7EIL1 84 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 ICOSQ9Y6W8 199 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 H3BNG1 76 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 F8WDY8 70 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
PDPN-201ENST00000294489 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
PDPN-201ENST00000294489 A0A087WZ39 114 aa6.31□□□□□ -1.4
PDPN-201ENST00000294489 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
PDPN-201ENST00000294489 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
PDPN-201ENST00000294489 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
PDPN-201ENST00000294489 H3BMG7 143 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 NPC2P61916 151 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 COL6A5A8TX70 2615 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 F8W1H4 67 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 XCL1P47992 114 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 Q1RN00 199 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 LELP1Q5T871 98 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 DAND5Q8N907 189 aa6.3□□□□□ -1.4
PDPN-201ENST00000294489 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
PDPN-201ENST00000294489 PSMB2P49721 201 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 A0A0U1RRA0 63 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 H7C2G1 150 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 SCGB1A1P11684 91 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 SPATA25Q9BR10 227 aa6.29□□□□□ -1.4
PDPN-201ENST00000294489 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
PDPN-201ENST00000294489 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms