RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 AKAP9Q99996 3911 aa13.57□□□□□ -0.24
LSM12-201ENST00000293406 PRB1P04280 392 aa13.56□□□□□ -0.24
LSM12-201ENST00000293406 CRPP02741 224 aa13.56□□□□□ -0.24
LSM12-201ENST00000293406 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
LSM12-201ENST00000293406 C16orf74Q96GX8 76 aa13.56□□□□□ -0.24
LSM12-201ENST00000293406 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
LSM12-201ENST00000293406 PTPN13Q12923 2485 aa13.55□□□□□ -0.24
LSM12-201ENST00000293406 GIG44P09565 113 aaPredicted RBP13.55□□□□□ -0.24
LSM12-201ENST00000293406 TOMM7Q9P0U1 55 aa13.55□□□□□ -0.24
LSM12-201ENST00000293406 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
LSM12-201ENST00000293406 FAM222AQ5U5X8 452 aa13.55□□□□□ -0.24
LSM12-201ENST00000293406 LRRC75A-AS1Q8N1F1 130 aa13.55□□□□□ -0.24
LSM12-201ENST00000293406 IGKV3OR2-268A0A0C4DH90 116 aa13.54□□□□□ -0.24
LSM12-201ENST00000293406 TRBV6-4A0A1B0GX49 114 aa13.54□□□□□ -0.24
LSM12-201ENST00000293406 PLAC8L1A1L4L8 177 aa13.54□□□□□ -0.24
LSM12-201ENST00000293406 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
LSM12-201ENST00000293406 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 SND1-IT1Q9HBX3 110 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 WNK1Q9H4A3 2382 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 SMCR5Q8TEV8 140 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 IMUPQ9GZP8 106 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 C22orf24Q9Y442 160 aa13.53□□□□□ -0.24
LSM12-201ENST00000293406 LINC00337Q8N6G1 96 aa13.52□□□□□ -0.24
LSM12-201ENST00000293406 LRRK2Q5S007 2527 aa13.52□□□□□ -0.24
LSM12-201ENST00000293406 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.25
LSM12-201ENST00000293406 LINC00643Q86TS7 51 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 Q9HAA7 133 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
LSM12-201ENST00000293406 CMC4P56277 68 aaPredicted RBP13.51□□□□□ -0.25
LSM12-201ENST00000293406 LINC00158P58513 81 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 ABCA12Q86UK0 2595 aa13.51□□□□□ -0.25
LSM12-201ENST00000293406 CUBNO60494 3623 aa13.5□□□□□ -0.25
LSM12-201ENST00000293406 EPG5Q9HCE0 2579 aa13.5□□□□□ -0.25
LSM12-201ENST00000293406 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
LSM12-201ENST00000293406 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
LSM12-201ENST00000293406 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
LSM12-201ENST00000293406 MALP21145 153 aa13.49□□□□□ -0.25
LSM12-201ENST00000293406 FAM236AA0A1B0GUQ0 79 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 FAM236BA0A1B0GV22 79 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 OVOL2Q9BRP0 275 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 TRBV6-8A0A0A6YYG3 113 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
LSM12-201ENST00000293406 IGHV3OR16-9A0A0B4J2B5 98 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 NOTCH3Q9UM47 2321 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 SDIM1Q6ZPB5 146 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 ESM1Q9NQ30 184 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 TLN2Q9Y4G6 2542 aa13.47□□□□□ -0.25
LSM12-201ENST00000293406 DNAL4O96015 105 aa13.46□□□□□ -0.25
LSM12-201ENST00000293406 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
LSM12-201ENST00000293406 SVIPQ8NHG7 77 aa13.46□□□□□ -0.25
LSM12-201ENST00000293406 ZNF469Q96JG9 3925 aaPredicted RBP13.46□□□□□ -0.25
LSM12-201ENST00000293406 CCL18P55774 89 aa13.46□□□□□ -0.26
LSM12-201ENST00000293406 GAGE2AQ6NT46 116 aa13.46□□□□□ -0.26
LSM12-201ENST00000293406 IBA57-AS1B1ANH7 110 aa13.45□□□□□ -0.26
LSM12-201ENST00000293406 FHL2Q14192 279 aa13.45□□□□□ -0.26
LSM12-201ENST00000293406 CSNK1G2-AS1Q8NCQ2 148 aa13.45□□□□□ -0.26
LSM12-201ENST00000293406 A0A087WYN8 130 aa13.44□□□□□ -0.26
LSM12-201ENST00000293406 A0A087WZ39 114 aa13.44□□□□□ -0.26
LSM12-201ENST00000293406 PFN2P35080 140 aa13.44□□□□□ -0.26
LSM12-201ENST00000293406 C5orf38Q86SI9 138 aa13.44□□□□□ -0.26
LSM12-201ENST00000293406 C19orf73Q9NVV2 129 aa13.44□□□□□ -0.26
LSM12-201ENST00000293406 UBR5O95071 2799 aaPredicted RBP13.43□□□□□ -0.26
LSM12-201ENST00000293406 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
LSM12-201ENST00000293406 NF1P21359 2839 aa13.42□□□□□ -0.26
LSM12-201ENST00000293406 BBC3Q96PG8 261 aaPredicted RBP13.42□□□□□ -0.26
LSM12-201ENST00000293406 SETXQ7Z333 2677 aaKnown RBP13.42□□□□□ -0.26
LSM12-201ENST00000293406 H0YGX0 51 aa13.42□□□□□ -0.26
LSM12-201ENST00000293406 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
LSM12-201ENST00000293406 SONP18583 2426 aaKnown RBP13.42□□□□□ -0.26
LSM12-201ENST00000293406 ZFYVE26Q68DK2 2539 aa13.42□□□□□ -0.26
LSM12-201ENST00000293406 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.26
LSM12-201ENST00000293406 PAX4O43316 350 aa13.4□□□□□ -0.26
LSM12-201ENST00000293406 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
LSM12-201ENST00000293406 NBPF19A0A087WUL8 3843 aa13.4□□□□□ -0.26
LSM12-201ENST00000293406 LINC01006Q8NI28 216 aa13.4□□□□□ -0.26
LSM12-201ENST00000293406 LINC00959A0A1B0GUT2 108 aa13.39□□□□□ -0.27
LSM12-201ENST00000293406 WFDC11Q8NEX6 87 aa13.39□□□□□ -0.27
LSM12-201ENST00000293406 ATP5G1P05496 136 aa13.39□□□□□ -0.27
LSM12-201ENST00000293406 CXCL5P42830 114 aa13.39□□□□□ -0.27
LSM12-201ENST00000293406 C6orf226Q5I0X4 101 aa13.38□□□□□ -0.27
LSM12-201ENST00000293406 OR13C6PQ8NH95 151 aa13.38□□□□□ -0.27
LSM12-201ENST00000293406 C11orf68Q9H3H3 251 aaKnown RBP13.38□□□□□ -0.27
LSM12-201ENST00000293406 C9orf129Q5T035 196 aaKnown RBP13.37□□□□□ -0.27
LSM12-201ENST00000293406 ZNF843Q8N446 348 aa13.37□□□□□ -0.27
LSM12-201ENST00000293406 LECT2O14960 151 aa13.36□□□□□ -0.27
LSM12-201ENST00000293406 C14orf132Q9NPU4 83 aa13.36□□□□□ -0.27
LSM12-201ENST00000293406 ITPR3Q14573 2671 aa13.36□□□□□ -0.27
LSM12-201ENST00000293406 DEFB130BP0DP73 79 aa13.36□□□□□ -0.27
LSM12-201ENST00000293406 DEFB130AP0DP74 79 aa13.36□□□□□ -0.27
LSM12-201ENST00000293406 APCP25054 2843 aa13.35□□□□□ -0.27
LSM12-201ENST00000293406 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
LSM12-201ENST00000293406 XCL1P47992 114 aa13.34□□□□□ -0.27
LSM12-201ENST00000293406 SMIM20Q8N5G0 67 aa13.34□□□□□ -0.27
LSM12-201ENST00000293406 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
LSM12-201ENST00000293406 C16orf95Q9H693 158 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms