RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 H3BUT2 72 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 C9orf118A6NHY6 69 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 CLPSL2Q6UWE3 100 aa11.53□□□□□ -0.56
HIF3A-203ENST00000291300 A0A0J9YWU9 116 aa11.52□□□□□ -0.57
HIF3A-203ENST00000291300 VAMP3Q15836 100 aa11.52□□□□□ -0.57
HIF3A-203ENST00000291300 Q6ZTC4 211 aa11.52□□□□□ -0.57
HIF3A-203ENST00000291300 LITAFQ99732 161 aa11.52□□□□□ -0.57
HIF3A-203ENST00000291300 HUWE1Q7Z6Z7 4374 aaKnown RBP11.52□□□□□ -0.57
HIF3A-203ENST00000291300 K7EIL1 84 aa11.51□□□□□ -0.57
HIF3A-203ENST00000291300 CCL25O15444 150 aa11.51□□□□□ -0.57
HIF3A-203ENST00000291300 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
HIF3A-203ENST00000291300 SPANXB1Q9NS25 103 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-203ENST00000291300 ADAMTSL4-AS1Q5T5F5 129 aa11.51□□□□□ -0.57
HIF3A-203ENST00000291300 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
HIF3A-203ENST00000291300 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
HIF3A-203ENST00000291300 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
HIF3A-203ENST00000291300 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
HIF3A-203ENST00000291300 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
HIF3A-203ENST00000291300 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
HIF3A-203ENST00000291300 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
HIF3A-203ENST00000291300 A0A1B0GWB2 263 aa11.48□□□□□ -0.57
HIF3A-203ENST00000291300 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-203ENST00000291300 UBE2V1Q13404 147 aa11.48□□□□□ -0.57
HIF3A-203ENST00000291300 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-203ENST00000291300 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
HIF3A-203ENST00000291300 MUSTN1Q8IVN3 82 aa11.47□□□□□ -0.57
HIF3A-203ENST00000291300 Q9H8V8 135 aa11.47□□□□□ -0.57
HIF3A-203ENST00000291300 NDUFA1O15239 70 aa11.46□□□□□ -0.57
HIF3A-203ENST00000291300 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
HIF3A-203ENST00000291300 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
HIF3A-203ENST00000291300 DAND5Q8N907 189 aa11.46□□□□□ -0.57
HIF3A-203ENST00000291300 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 IGLL5B9A064 214 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 NPC2P61916 151 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 APOMO95445 188 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 XCL1P47992 114 aa11.45□□□□□ -0.58
HIF3A-203ENST00000291300 A0A1W2PPM0 123 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 KPRPQ5T749 579 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-203ENST00000291300 LYPD5Q6UWN5 251 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 A4D1N5 150 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 TMEM238C9JI98 176 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 CFC1BP0CG36 223 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 CFC1P0CG37 223 aa11.44□□□□□ -0.58
HIF3A-203ENST00000291300 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
HIF3A-203ENST00000291300 LELP1Q5T871 98 aa11.43□□□□□ -0.58
HIF3A-203ENST00000291300 ANGP03950 147 aaKnown RBP11.42□□□□□ -0.58
HIF3A-203ENST00000291300 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
HIF3A-203ENST00000291300 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
HIF3A-203ENST00000291300 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
HIF3A-203ENST00000291300 A0A087WZ39 114 aa11.41□□□□□ -0.58
HIF3A-203ENST00000291300 PRSS2P07478 247 aa11.41□□□□□ -0.58
HIF3A-203ENST00000291300 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
HIF3A-203ENST00000291300 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
HIF3A-203ENST00000291300 A6NJY4 79 aa11.4□□□□□ -0.58
HIF3A-203ENST00000291300 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
HIF3A-203ENST00000291300 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
HIF3A-203ENST00000291300 PGPEP1Q9NXJ5 209 aa11.4□□□□□ -0.58
HIF3A-203ENST00000291300 REG3AQ06141 175 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 MIAQ16674 131 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 DEFB131BA0A096LNP1 70 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 SS18Q15532 418 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
HIF3A-203ENST00000291300 GAGE10A6NGK3 116 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 K7EP34 96 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 TSPAN13O95857 204 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 SPCS1Q9Y6A9 102 aa11.38□□□□□ -0.59
HIF3A-203ENST00000291300 DNAH9Q9NYC9 4486 aa11.37□□□□□ -0.59
HIF3A-203ENST00000291300 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
HIF3A-203ENST00000291300 FABP2P12104 132 aa11.37□□□□□ -0.59
HIF3A-203ENST00000291300 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-203ENST00000291300 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
HIF3A-203ENST00000291300 H3BNG1 76 aa11.36□□□□□ -0.59
HIF3A-203ENST00000291300 TIMM17BO60830 172 aa11.36□□□□□ -0.59
HIF3A-203ENST00000291300 ESRGQ1W209 222 aa11.36□□□□□ -0.59
HIF3A-203ENST00000291300 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
HIF3A-203ENST00000291300 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
HIF3A-203ENST00000291300 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
HIF3A-203ENST00000291300 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
HIF3A-203ENST00000291300 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
HIF3A-203ENST00000291300 PRO1854Q9UHT4 67 aa11.34□□□□□ -0.59
HIF3A-203ENST00000291300 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
HIF3A-203ENST00000291300 LINC00308Q8TCZ7 52 aa11.33□□□□□ -0.6
HIF3A-203ENST00000291300 H7C2G1 150 aa11.32□□□□□ -0.6
HIF3A-203ENST00000291300 FOXI1Q12951 378 aa11.32□□□□□ -0.6
HIF3A-203ENST00000291300 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
HIF3A-203ENST00000291300 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
HIF3A-203ENST00000291300 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
HIF3A-203ENST00000291300 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
HIF3A-203ENST00000291300 HERV-K104P63124 156 aa11.31□□□□□ -0.6
HIF3A-203ENST00000291300 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms