RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 ZNF625Q96I27 306 aaPredicted RBP13.41□□□□□ -0.26
SHF-201ENST00000290894 LITAFQ99732 161 aa13.41□□□□□ -0.26
SHF-201ENST00000290894 CHCHD5Q9BSY4 110 aa13.4□□□□□ -0.26
SHF-201ENST00000290894 TIRAPP58753 221 aa13.4□□□□□ -0.26
SHF-201ENST00000290894 GTSF1LQ9H1H1 148 aa13.4□□□□□ -0.26
SHF-201ENST00000290894 IGLV4-60A0A075B6I1 120 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 GYPEP15421 78 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 SH2D6Q7Z4S9 175 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 CSDC2Q9Y534 153 aaKnown RBP13.39□□□□□ -0.27
SHF-201ENST00000290894 IGLV5-45A0A087WSX0 123 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 HERVK_113P63121 156 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 ETDBQ3ZM63 59 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 KIR2DL5BQ8NHK3 375 aa13.39□□□□□ -0.27
SHF-201ENST00000290894 TRBV6-8A0A0A6YYG3 113 aa13.38□□□□□ -0.27
SHF-201ENST00000290894 ZFAND6Q6FIF0 208 aa13.38□□□□□ -0.27
SHF-201ENST00000290894 PRO0461Q9UI25 63 aa13.37□□□□□ -0.27
SHF-201ENST00000290894 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SHF-201ENST00000290894 PRO1854Q9UHT4 67 aa13.36□□□□□ -0.27
SHF-201ENST00000290894 ANK2Q01484 3957 aa13.36□□□□□ -0.27
SHF-201ENST00000290894 Q9H8V8 135 aa13.36□□□□□ -0.27
SHF-201ENST00000290894 PSMB2P49721 201 aa13.35□□□□□ -0.27
SHF-201ENST00000290894 LINC00612Q8N6U2 182 aa13.35□□□□□ -0.27
SHF-201ENST00000290894 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
SHF-201ENST00000290894 HERV-K104P63124 156 aa13.34□□□□□ -0.27
SHF-201ENST00000290894 SMAGPQ0VAQ4 97 aa13.34□□□□□ -0.27
SHF-201ENST00000290894 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 OXLD1Q5BKU9 147 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 ATP6V0E2Q8NHE4 81 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 CELA1Q9UNI1 258 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 NOTCH1P46531 2555 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 APOC4P55056 127 aa13.33□□□□□ -0.28
SHF-201ENST00000290894 IGLV5-39A0A0G2JS06 123 aa13.32□□□□□ -0.28
SHF-201ENST00000290894 F5H768 121 aa13.32□□□□□ -0.28
SHF-201ENST00000290894 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
SHF-201ENST00000290894 TMEM262E9PQX1 116 aa13.32□□□□□ -0.28
SHF-201ENST00000290894 NDUFA1O15239 70 aa13.31□□□□□ -0.28
SHF-201ENST00000290894 PRO0255Q9UI72 69 aa13.31□□□□□ -0.28
SHF-201ENST00000290894 MIAQ16674 131 aa13.31□□□□□ -0.28
SHF-201ENST00000290894 CLPSL2Q6UWE3 100 aa13.31□□□□□ -0.28
SHF-201ENST00000290894 COL6A5A8TX70 2615 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 SCGB1C2P0DMR2 95 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 WFDC9Q8NEX5 89 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 J3QR89 54 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 PAX4O43316 350 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 IGHV3-33P01772 117 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 Q1RN00 199 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 FAM19A3Q7Z5A8 133 aa13.3□□□□□ -0.28
SHF-201ENST00000290894 TCL1BO95988 128 aa13.29□□□□□ -0.28
SHF-201ENST00000290894 HTN3P15516 51 aa13.29□□□□□ -0.28
SHF-201ENST00000290894 PRIMA1Q86XR5 153 aa13.29□□□□□ -0.28
SHF-201ENST00000290894 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
SHF-201ENST00000290894 SMCPP49901 116 aaPredicted RBP13.28□□□□□ -0.28
SHF-201ENST00000290894 LYRM7Q5U5X0 104 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 SPANXDQ9BXN6 97 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 SPANXCQ9NY87 97 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 H7C423 109 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 DAD1P61803 113 aa13.28□□□□□ -0.28
SHF-201ENST00000290894 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
SHF-201ENST00000290894 KRTAP24-1Q3LI83 254 aa13.27□□□□□ -0.29
SHF-201ENST00000290894 Q8NAQ8 132 aa13.27□□□□□ -0.29
SHF-201ENST00000290894 A0A0B4J2C4 111 aa13.27□□□□□ -0.29
SHF-201ENST00000290894 Q8N3U1 123 aa13.27□□□□□ -0.29
SHF-201ENST00000290894 TENM3Q9P273 2699 aa13.26□□□□□ -0.29
SHF-201ENST00000290894 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.26□□□□□ -0.29
SHF-201ENST00000290894 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
SHF-201ENST00000290894 C5orf38Q86SI9 138 aa13.26□□□□□ -0.29
SHF-201ENST00000290894 TRBV20-1A0A075B6N2 111 aa13.24□□□□□ -0.29
SHF-201ENST00000290894 BAHCC1Q9P281 2608 aa13.24□□□□□ -0.29
SHF-201ENST00000290894 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
SHF-201ENST00000290894 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
SHF-201ENST00000290894 XCL1P47992 114 aa13.22□□□□□ -0.29
SHF-201ENST00000290894 KRTAP10-11P60412 298 aa13.22□□□□□ -0.29
SHF-201ENST00000290894 RETNQ9HD89 108 aa13.22□□□□□ -0.29
SHF-201ENST00000290894 SPATA25Q9BR10 227 aa13.22□□□□□ -0.29
SHF-201ENST00000290894 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
SHF-201ENST00000290894 IGHV3OR16-9A0A0B4J2B5 98 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 FOXI1Q12951 378 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 RNF183Q96D59 192 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 LINC00959A0A1B0GUT2 108 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 SOSTDC1Q6X4U4 206 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 LINC00308Q8TCZ7 52 aa13.21□□□□□ -0.29
SHF-201ENST00000290894 CMYA5Q8N3K9 4069 aa13.2□□□□□ -0.3
SHF-201ENST00000290894 TIMM17BO60830 172 aa13.2□□□□□ -0.3
SHF-201ENST00000290894 MIFP14174 115 aa13.2□□□□□ -0.3
SHF-201ENST00000290894 SS18L2Q9UHA2 77 aa13.2□□□□□ -0.3
SHF-201ENST00000290894 COX7B2Q8TF08 81 aa13.2□□□□□ -0.3
SHF-201ENST00000290894 TRIAP1O43715 76 aa13.19□□□□□ -0.3
SHF-201ENST00000290894 ATP5G1P05496 136 aa13.19□□□□□ -0.3
SHF-201ENST00000290894 WIPF1O43516 503 aa13.19□□□□□ -0.3
SHF-201ENST00000290894 C3orf56Q8N813 242 aa13.18□□□□□ -0.3
SHF-201ENST00000290894 SPART-AS1P0CW21 52 aa13.18□□□□□ -0.3
SHF-201ENST00000290894 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
SHF-201ENST00000290894 RPL13AP40429 203 aaKnown RBP13.17□□□□□ -0.3
SHF-201ENST00000290894 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
SHF-201ENST00000290894 IGLV10-54A0A075B6I4 117 aa13.17□□□□□ -0.3
SHF-201ENST00000290894 IFITM1P13164 125 aa13.16□□□□□ -0.3
SHF-201ENST00000290894 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
SHF-201ENST00000290894 A0A087WZ39 114 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms