RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
C9orf43-201ENST00000288462 LITAFQ99732 161 aa7.05□□□□□ -1.28
C9orf43-201ENST00000288462 A0A096LPF7 62 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 TMEM238C9JI98 176 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 H3BUT2 72 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 NDUFA1O15239 70 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 COL6A5A8TX70 2615 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 RBX1P62877 108 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 SH2D6Q7Z4S9 175 aa7.04□□□□□ -1.28
C9orf43-201ENST00000288462 CCL25O15444 150 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 HTN3P15516 51 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
C9orf43-201ENST00000288462 ICOSQ9Y6W8 199 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 NAA38Q9BRA0 125 aaKnown RBP7.03□□□□□ -1.28
C9orf43-201ENST00000288462 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
C9orf43-201ENST00000288462 TIMM17BO60830 172 aa7.02□□□□□ -1.29
C9orf43-201ENST00000288462 IGHV3OR16-9A0A0B4J2B5 98 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 IGLL5B9A064 214 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 H3BNG1 76 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 ZNF625Q96I27 306 aaPredicted RBP7.01□□□□□ -1.29
C9orf43-201ENST00000288462 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 LELP1Q5T871 98 aa7.01□□□□□ -1.29
C9orf43-201ENST00000288462 IGKV3OR2-268A0A0C4DH90 116 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 K7EP34 96 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 MIAQ16674 131 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 Q9H8V8 135 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 A0A087WZ39 114 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 FABP2P12104 132 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
C9orf43-201ENST00000288462 KPRPQ5T749 579 aaPredicted RBP7□□□□□ -1.29
C9orf43-201ENST00000288462 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
C9orf43-201ENST00000288462 RPL24P83731 157 aaKnown RBP6.99□□□□□ -1.29
C9orf43-201ENST00000288462 Q6ZTC4 211 aa6.99□□□□□ -1.29
C9orf43-201ENST00000288462 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
C9orf43-201ENST00000288462 TENM3Q9P273 2699 aa6.99□□□□□ -1.29
C9orf43-201ENST00000288462 A4D1N5 150 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 CFC1P0CG37 223 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 SS18Q15532 418 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 GTF2H5Q6ZYL4 71 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 GAGE10A6NGK3 116 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 K7EIL1 84 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
C9orf43-201ENST00000288462 APOMO95445 188 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 HERV-K104P63124 156 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 Q8N3U1 123 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
C9orf43-201ENST00000288462 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 SPATA25Q9BR10 227 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 TM2D3Q9BRN9 247 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
C9orf43-201ENST00000288462 TSPAN13O95857 204 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 IFITM1P13164 125 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 LINC00269Q8N2A0 174 aa6.97□□□□□ -1.29
C9orf43-201ENST00000288462 NOTCH1P46531 2555 aa6.96□□□□□ -1.29
C9orf43-201ENST00000288462 PRB2P02812 416 aaPredicted RBP6.96□□□□□ -1.3
C9orf43-201ENST00000288462 XCL1P47992 114 aa6.96□□□□□ -1.3
C9orf43-201ENST00000288462 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
C9orf43-201ENST00000288462 NBEAL1Q6ZS30 2694 aa6.96□□□□□ -1.3
C9orf43-201ENST00000288462 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
C9orf43-201ENST00000288462 REG3AQ06141 175 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 NANOS2P60321 138 aaKnown RBP6.95□□□□□ -1.3
C9orf43-201ENST00000288462 MDFIQ99750 246 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 PPDPFQ9H3Y8 114 aa6.95□□□□□ -1.3
C9orf43-201ENST00000288462 PRSS2P07478 247 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 CD164L2Q6UWJ8 174 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
C9orf43-201ENST00000288462 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 DEFB131BA0A096LNP1 70 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 SFTA2Q6UW10 78 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 DAND5Q8N907 189 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
C9orf43-201ENST00000288462 HUWE1Q7Z6Z7 4374 aaKnown RBP6.93□□□□□ -1.3
C9orf43-201ENST00000288462 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
C9orf43-201ENST00000288462 NPC2P61916 151 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 Q8IZM0 81 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 COX7A2LO14548 114 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 FOXI1Q12951 378 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
C9orf43-201ENST00000288462 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 WFDC10BQ8IUB3 73 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 KLK12Q9UKR0 248 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
C9orf43-201ENST00000288462 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms