RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.75e-8■■□□□ 12.4
LIN7C-201ENST00000278193 PIN1P1O15428 100 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 ORMDL1Q9P0S3 153 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 DSCAMO60469 2012 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 Q6ZR03 302 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 ZNF22P17026 224 aaPredicted RBP4.44□□□□□ -1.7
LIN7C-201ENST00000278193 ZNF137PP52743 207 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 LINC01006Q8NI28 216 aa4.44□□□□□ -1.7
LIN7C-201ENST00000278193 A0A087X002 238 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
LIN7C-201ENST00000278193 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 NAV2Q8IVL1 2488 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 CD24P25063 80 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 HTN1P15515 57 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
LIN7C-201ENST00000278193 DOPEY2Q9Y3R5 2298 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 TRBV6-6A0A0A6YYG2 114 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 PPP1R17O96001 155 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 PRB3Q04118 309 aaPredicted RBP4.42□□□□□ -1.7
LIN7C-201ENST00000278193 DOCK10Q96BY6 2186 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 C17orf98A8MV24 154 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 H3BUA1 57 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 ARMS2P0C7Q2 107 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 UBE2DNLQ8IWF7 75 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 TMEM167AQ8TBQ9 72 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 TMEM14BQ9NUH8 114 aa4.42□□□□□ -1.7
LIN7C-201ENST00000278193 SPINK4O60575 86 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 IGLV1-51P01701 117 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 BAALC-AS2P0C853 105 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 ROMO1P60602 79 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 FSHBP01225 129 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 TMEM190Q8WZ59 177 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 CYSRT1A8MQ03 144 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 M0R3E3 92 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
LIN7C-201ENST00000278193 NDUFA11Q86Y39 141 aa4.4□□□□□ -1.7
LIN7C-201ENST00000278193 REV3LO60673 3130 aa4.4□□□□□ -1.7
LIN7C-201ENST00000278193 DOCK11Q5JSL3 2073 aa4.4□□□□□ -1.7
LIN7C-201ENST00000278193 SPTBN4Q9H254 2564 aa4.4□□□□□ -1.7
LIN7C-201ENST00000278193 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.71
LIN7C-201ENST00000278193 Q6ZTC4 211 aa4.4□□□□□ -1.71
LIN7C-201ENST00000278193 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
LIN7C-201ENST00000278193 LINC00574Q9H8X3 128 aa4.4□□□□□ -1.71
LIN7C-201ENST00000278193 CADP27708 2225 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 CFC1P0CG37 223 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 FASNP49327 2511 aaKnown RBP4.39□□□□□ -1.71
LIN7C-201ENST00000278193 WNK2Q9Y3S1 2297 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 PRCDQ00LT1 54 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 J3QRE1 110 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 FREM3P0C091 2139 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 CCDC168Q8NDH2 2452 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 SERF2P84101 59 aa4.39□□□□□ -1.71
LIN7C-201ENST00000278193 PLXNB3Q9ULL4 1909 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 WFDC9Q8NEX5 89 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 TLN1Q9Y490 2541 aaKnown RBP4.38□□□□□ -1.71
LIN7C-201ENST00000278193 TRBV6-8A0A0A6YYG3 113 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 PROK1P58294 105 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 MYO18BQ8IUG5 2567 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 MUC4Q99102 2169 aa4.38□□□□□ -1.71
LIN7C-201ENST00000278193 LHBP01229 141 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 HTN3P15516 51 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 CSPG4Q6UVK1 2322 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 CTXND1A0A1B0GTU2 59 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 KRTAP4-16G5E9R7 235 aaPredicted RBP4.37□□□□□ -1.71
LIN7C-201ENST00000278193 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 SMIM29Q86T20 159 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 MALRD1Q5VYJ5 2156 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 COL4A2P08572 1712 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 CACNA1DQ01668 2161 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 DNAH10OSP0CZ25 163 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 ZNF833PQ6ZTB9 187 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
LIN7C-201ENST00000278193 CEP295Q9C0D2 2601 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 H3BQ85 93 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 S4R3C0 116 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 TRGV2A0A075B6R0 118 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 LRCOL1A6NCL2 159 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 TFF3Q07654 80 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 FAM74A4Q5TZK3 123 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 ARHGAP21Q5T5U3 1957 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 E7EUB6 86 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
LIN7C-201ENST00000278193 MOBPQ13875 183 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 CHD7Q9P2D1 2997 aa4.36□□□□□ -1.71
LIN7C-201ENST00000278193 ANKRD11Q6UB99 2663 aaPredicted RBP4.35□□□□□ -1.71
LIN7C-201ENST00000278193 ABCA1O95477 2261 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 A0A087WVE0 104 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 TRBV10-1A0A0K0K1A3 114 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 MRPL36Q9P0J6 103 aaKnown RBP4.35□□□□□ -1.71
LIN7C-201ENST00000278193 LRP4O75096 1905 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 C5orf42Q9H799 3197 aa4.35□□□□□ -1.71
LIN7C-201ENST00000278193 MED13LQ71F56 2210 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms