RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 PFN2P35080 140 aa9.23□□□□□ -0.93
COL8A1-202ENST00000273342 ZNF469Q96JG9 3925 aaPredicted RBP9.23□□□□□ -0.93
COL8A1-202ENST00000273342 SLPIP03973 132 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 A0A087WYN8 130 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 LOC100131303A0A0U1RQF7 123 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 LINC00158P58513 81 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 VPREB3Q9UKI3 123 aa9.22□□□□□ -0.93
COL8A1-202ENST00000273342 SETXQ7Z333 2677 aaKnown RBP9.22□□□□□ -0.93
COL8A1-202ENST00000273342 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
COL8A1-202ENST00000273342 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.93
COL8A1-202ENST00000273342 A0A087WVE0 104 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 ACYP1P07311 99 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 PLA2G2AP14555 144 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 BEAN1Q3B7T3 259 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 INSP01308 110 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 CRPP02741 224 aa9.21□□□□□ -0.94
COL8A1-202ENST00000273342 DNAL4O96015 105 aa9.2□□□□□ -0.94
COL8A1-202ENST00000273342 MALP21145 153 aa9.2□□□□□ -0.94
COL8A1-202ENST00000273342 USP24Q9UPU5 2620 aa9.2□□□□□ -0.94
COL8A1-202ENST00000273342 UBE2L6O14933 153 aa9.2□□□□□ -0.94
COL8A1-202ENST00000273342 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
COL8A1-202ENST00000273342 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
COL8A1-202ENST00000273342 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
COL8A1-202ENST00000273342 HIST2H2BCQ6DN03 193 aa9.19□□□□□ -0.94
COL8A1-202ENST00000273342 TRACP01848 142 aa9.19□□□□□ -0.94
COL8A1-202ENST00000273342 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
COL8A1-202ENST00000273342 DNAJC30Q96LL9 226 aa9.19□□□□□ -0.94
COL8A1-202ENST00000273342 ZNF702PQ9H963 129 aa9.19□□□□□ -0.94
COL8A1-202ENST00000273342 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
COL8A1-202ENST00000273342 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 F5H768 121 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 TMEM126AQ9H061 195 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 PRORYQ9H606 182 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 NCR3O14931 201 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
COL8A1-202ENST00000273342 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 LECT2O14960 151 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 STHQ8IWL8 128 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
COL8A1-202ENST00000273342 UQCRQO14949 82 aa9.16□□□□□ -0.94
COL8A1-202ENST00000273342 PAX4O43316 350 aa9.16□□□□□ -0.94
COL8A1-202ENST00000273342 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
COL8A1-202ENST00000273342 GCN1Q92616 2671 aaKnown RBP9.16□□□□□ -0.94
COL8A1-202ENST00000273342 K7EQD1 137 aa9.16□□□□□ -0.94
COL8A1-202ENST00000273342 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
COL8A1-202ENST00000273342 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
COL8A1-202ENST00000273342 RNASE1P07998 156 aaKnown RBP9.15□□□□□ -0.94
COL8A1-202ENST00000273342 INAFM2P0DMQ5 153 aa9.15□□□□□ -0.94
COL8A1-202ENST00000273342 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
COL8A1-202ENST00000273342 COPS9Q8WXC6 57 aa9.15□□□□□ -0.95
COL8A1-202ENST00000273342 WFDC10AQ9H1F0 79 aa9.15□□□□□ -0.95
COL8A1-202ENST00000273342 A0A1B0GX51 115 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 ODF3L2Q3SX64 289 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 WFDC9Q8NEX5 89 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
COL8A1-202ENST00000273342 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 CCL18P55774 89 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 LINC01356Q8N9X3 169 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
COL8A1-202ENST00000273342 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 COX7CP15954 63 aa9.13□□□□□ -0.95
COL8A1-202ENST00000273342 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
COL8A1-202ENST00000273342 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
COL8A1-202ENST00000273342 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
COL8A1-202ENST00000273342 APCP25054 2843 aa9.12□□□□□ -0.95
COL8A1-202ENST00000273342 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
COL8A1-202ENST00000273342 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
COL8A1-202ENST00000273342 LRRC75A-AS1Q8N1F1 130 aa9.1□□□□□ -0.95
COL8A1-202ENST00000273342 TRGV4A0A0C4DH28 118 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 A8MTW9 85 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 Q6YL49 198 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 ITPR2Q14571 2701 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 CXCL5P42830 114 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 HILS1P60008 231 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 FAM222AQ5U5X8 452 aa9.09□□□□□ -0.95
COL8A1-202ENST00000273342 FAM19A5Q7Z5A7 132 aaPredicted RBP9.09□□□□□ -0.95
COL8A1-202ENST00000273342 A0A096LPF7 62 aa9.08□□□□□ -0.96
COL8A1-202ENST00000273342 XCL1P47992 114 aa9.08□□□□□ -0.96
COL8A1-202ENST00000273342 C6orf226Q5I0X4 101 aa9.08□□□□□ -0.96
COL8A1-202ENST00000273342 BBC3Q96PG8 261 aaPredicted RBP9.07□□□□□ -0.96
COL8A1-202ENST00000273342 DSCR8Q96T75 97 aa9.07□□□□□ -0.96
COL8A1-202ENST00000273342 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
COL8A1-202ENST00000273342 ATOX1O00244 68 aa9.07□□□□□ -0.96
COL8A1-202ENST00000273342 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms