RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
CNOT9-201ENST00000273064 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
CNOT9-201ENST00000273064 BAALC-AS2P0C853 105 aa10.61□□□□□ -0.71
CNOT9-201ENST00000273064 C15orf53Q8NAA6 179 aa10.61□□□□□ -0.71
CNOT9-201ENST00000273064 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
CNOT9-201ENST00000273064 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
CNOT9-201ENST00000273064 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
CNOT9-201ENST00000273064 TRBV6-5A0A0K0K1A5 114 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 APOC4P55056 127 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 LY6G6DO95868 133 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
CNOT9-201ENST00000273064 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
CNOT9-201ENST00000273064 C1orf158Q8N1D5 194 aa10.58□□□□□ -0.71
CNOT9-201ENST00000273064 TRIAP1O43715 76 aa10.58□□□□□ -0.72
CNOT9-201ENST00000273064 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
CNOT9-201ENST00000273064 PRB2P02812 416 aaPredicted RBP10.58□□□□□ -0.72
CNOT9-201ENST00000273064 LINC00315P59091 139 aa10.57□□□□□ -0.72
CNOT9-201ENST00000273064 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
CNOT9-201ENST00000273064 LRRC75A-AS1Q8N1F1 130 aa10.56□□□□□ -0.72
CNOT9-201ENST00000273064 IGKV2D-24A0A075B6R9 120 aa10.56□□□□□ -0.72
CNOT9-201ENST00000273064 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 COX6A2Q02221 97 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 MIAQ16674 131 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 LECT2O14960 151 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
CNOT9-201ENST00000273064 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
CNOT9-201ENST00000273064 SLPIP03973 132 aa10.54□□□□□ -0.72
CNOT9-201ENST00000273064 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
CNOT9-201ENST00000273064 NCR3O14931 201 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 CRYBA4P53673 196 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 COX7A2LO14548 114 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 CLUHP3Q96NS8 147 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 UFSP1Q6NVU6 142 aa10.53□□□□□ -0.72
CNOT9-201ENST00000273064 IFITM1P13164 125 aa10.52□□□□□ -0.72
CNOT9-201ENST00000273064 HIGD2BQ4VC39 106 aa10.52□□□□□ -0.72
CNOT9-201ENST00000273064 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.72
CNOT9-201ENST00000273064 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
CNOT9-201ENST00000273064 TRBV6-8A0A0A6YYG3 113 aa10.51□□□□□ -0.73
CNOT9-201ENST00000273064 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 B5MCH6 92 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
CNOT9-201ENST00000273064 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 NSD1Q96L73 2696 aaPredicted RBP10.5□□□□□ -0.73
CNOT9-201ENST00000273064 HAMPP81172 84 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 CHCHD7Q9BUK0 85 aa10.5□□□□□ -0.73
CNOT9-201ENST00000273064 HERV-K104P63124 156 aa10.49□□□□□ -0.73
CNOT9-201ENST00000273064 DEFB105AQ8NG35 78 aa10.48□□□□□ -0.73
CNOT9-201ENST00000273064 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
CNOT9-201ENST00000273064 UBE2D1P51668 147 aa10.48□□□□□ -0.73
CNOT9-201ENST00000273064 PYGO1Q9Y3Y4 419 aa10.48□□□□□ -0.73
CNOT9-201ENST00000273064 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CNOT9-201ENST00000273064 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
CNOT9-201ENST00000273064 HILS1P60008 231 aa10.47□□□□□ -0.73
CNOT9-201ENST00000273064 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
CNOT9-201ENST00000273064 UBE2DNLQ8IWF7 75 aa10.47□□□□□ -0.73
CNOT9-201ENST00000273064 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
CNOT9-201ENST00000273064 PSCAO43653 123 aa10.46□□□□□ -0.73
CNOT9-201ENST00000273064 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
CNOT9-201ENST00000273064 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.74
CNOT9-201ENST00000273064 CITED1Q99966 193 aa10.46□□□□□ -0.74
CNOT9-201ENST00000273064 C14orf132Q9NPU4 83 aa10.46□□□□□ -0.74
CNOT9-201ENST00000273064 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
CNOT9-201ENST00000273064 REG3AQ06141 175 aa10.45□□□□□ -0.74
CNOT9-201ENST00000273064 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-201ENST00000273064 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-201ENST00000273064 CDC42SE2Q9NRR3 84 aa10.45□□□□□ -0.74
CNOT9-201ENST00000273064 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-201ENST00000273064 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
CNOT9-201ENST00000273064 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 UBE2D3P61077 147 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 UBE2D2P62837 147 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 MXRA5Q9NR99 2828 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 INAFM2P0DMQ5 153 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 RETNQ9HD89 108 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 APCP25054 2843 aa10.44□□□□□ -0.74
CNOT9-201ENST00000273064 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 NIPBLQ6KC79 2804 aaeCLIP10.43□□□□□ -0.74
CNOT9-201ENST00000273064 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 IGLV1-51P01701 117 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 ZNF575Q86XF7 245 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 NDUFA1O15239 70 aa10.43□□□□□ -0.74
CNOT9-201ENST00000273064 BRI3O95415 125 aa10.42□□□□□ -0.74
CNOT9-201ENST00000273064 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CNOT9-201ENST00000273064 XGP55808 180 aa10.42□□□□□ -0.74
CNOT9-201ENST00000273064 TIRAPP58753 221 aa10.42□□□□□ -0.74
CNOT9-201ENST00000273064 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
CNOT9-201ENST00000273064 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
CNOT9-201ENST00000273064 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
CNOT9-201ENST00000273064 NKAPP1Q8N9T2 125 aa10.4□□□□□ -0.74
CNOT9-201ENST00000273064 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
CNOT9-201ENST00000273064 BAHCC1Q9P281 2608 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms