RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 FAM236BA0A1B0GV22 79 aa19.54■□□□□ 0.72
CBX4-201ENST00000269397 A0A1W2PRX2 142 aa19.54■□□□□ 0.72
CBX4-201ENST00000269397 ZNF469Q96JG9 3925 aaPredicted RBP19.54■□□□□ 0.72
CBX4-201ENST00000269397 NOP10Q9NPE3 64 aaKnown RBP19.53■□□□□ 0.72
CBX4-201ENST00000269397 C22orf24Q9Y442 160 aa19.53■□□□□ 0.72
CBX4-201ENST00000269397 NBPF19A0A087WUL8 3843 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 TOMM7Q9P0U1 55 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 CR1P17927 2039 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 LOC100131303A0A0U1RQF7 123 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 FAM19A3Q7Z5A8 133 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 COPS9Q8WXC6 57 aa19.52■□□□□ 0.72
CBX4-201ENST00000269397 CSDC2Q9Y534 153 aaKnown RBP19.52■□□□□ 0.72
CBX4-201ENST00000269397 IL17DQ8TAD2 202 aa19.51■□□□□ 0.71
CBX4-201ENST00000269397 UBE2L6O14933 153 aa19.5■□□□□ 0.71
CBX4-201ENST00000269397 SMIM20Q8N5G0 67 aa19.49■□□□□ 0.71
CBX4-201ENST00000269397 TRACP01848 142 aa19.49■□□□□ 0.71
CBX4-201ENST00000269397 TRBV10-1A0A0K0K1A3 114 aa19.48■□□□□ 0.71
CBX4-201ENST00000269397 ACYP1P07311 99 aa19.48■□□□□ 0.71
CBX4-201ENST00000269397 MIR7-3HGQ8N6C7 128 aa19.48■□□□□ 0.71
CBX4-201ENST00000269397 HERV-K104P63124 156 aa19.48■□□□□ 0.71
CBX4-201ENST00000269397 LINC00337Q8N6G1 96 aa19.47■□□□□ 0.71
CBX4-201ENST00000269397 ZNF462Q96JM2 2506 aa19.47■□□□□ 0.71
CBX4-201ENST00000269397 TMEM243Q9BU79 118 aa19.46■□□□□ 0.71
CBX4-201ENST00000269397 HIST2H2BCQ6DN03 193 aa19.46■□□□□ 0.71
CBX4-201ENST00000269397 PLA2G2AP14555 144 aa19.45■□□□□ 0.7
CBX4-201ENST00000269397 KRTAP10-9P60411 292 aa19.44■□□□□ 0.7
CBX4-201ENST00000269397 GAGE2AQ6NT46 116 aa19.44■□□□□ 0.7
CBX4-201ENST00000269397 PRB1P04280 392 aa19.44■□□□□ 0.7
CBX4-201ENST00000269397 CRPP02741 224 aa19.43■□□□□ 0.7
CBX4-201ENST00000269397 IGKV2-28A0A075B6P5 120 aa19.43■□□□□ 0.7
CBX4-201ENST00000269397 IGKV2D-28P01615 120 aa19.43■□□□□ 0.7
CBX4-201ENST00000269397 WFDC10AQ9H1F0 79 aa19.43■□□□□ 0.7
CBX4-201ENST00000269397 SND1-IT1Q9HBX3 110 aa19.42■□□□□ 0.7
CBX4-201ENST00000269397 CCDC168Q8NDH2 2452 aa19.42■□□□□ 0.7
CBX4-201ENST00000269397 LINC00643Q86TS7 51 aa19.42■□□□□ 0.7
CBX4-201ENST00000269397 COX7B2Q8TF08 81 aa19.42■□□□□ 0.7
CBX4-201ENST00000269397 TRGV2A0A075B6R0 118 aa19.41■□□□□ 0.7
CBX4-201ENST00000269397 LINC00158P58513 81 aa19.4■□□□□ 0.7
CBX4-201ENST00000269397 TRAV13-2A0A0B4J235 113 aa19.39■□□□□ 0.7
CBX4-201ENST00000269397 A0A087WYN8 130 aa19.39■□□□□ 0.69
CBX4-201ENST00000269397 MALP21145 153 aa19.39■□□□□ 0.69
CBX4-201ENST00000269397 C9orf129Q5T035 196 aaKnown RBP19.39■□□□□ 0.69
CBX4-201ENST00000269397 RPL28P46779 137 aaKnown RBP19.38■□□□□ 0.69
CBX4-201ENST00000269397 IGLV4-60A0A075B6I1 120 aa19.38■□□□□ 0.69
CBX4-201ENST00000269397 SMIM11BQ8TCY0 68 aa19.37■□□□□ 0.69
CBX4-201ENST00000269397 IMUPQ9GZP8 106 aa19.37■□□□□ 0.69
CBX4-201ENST00000269397 ATP5G1P05496 136 aa19.36■□□□□ 0.69
CBX4-201ENST00000269397 RPL35AP18077 110 aaKnown RBP19.36■□□□□ 0.69
CBX4-201ENST00000269397 PFN2P35080 140 aa19.36■□□□□ 0.69
CBX4-201ENST00000269397 GIG44P09565 113 aaPredicted RBP19.36■□□□□ 0.69
CBX4-201ENST00000269397 CCL24O00175 119 aa19.34■□□□□ 0.69
CBX4-201ENST00000269397 FAM222AQ5U5X8 452 aa19.34■□□□□ 0.69
CBX4-201ENST00000269397 C11orf68Q9H3H3 251 aaKnown RBP19.34■□□□□ 0.69
CBX4-201ENST00000269397 PLAC8L1A1L4L8 177 aa19.33■□□□□ 0.69
CBX4-201ENST00000269397 CCL18P55774 89 aa19.33■□□□□ 0.69
CBX4-201ENST00000269397 C5orf38Q86SI9 138 aa19.33■□□□□ 0.69
CBX4-201ENST00000269397 FN1P02751 2386 aaKnown RBP19.32■□□□□ 0.68
CBX4-201ENST00000269397 DNAL4O96015 105 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 TRGV4A0A0C4DH28 118 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 PF4P02776 101 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 INAFM2P0DMQ5 153 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 SDIM1Q6ZPB5 146 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 C14orf132Q9NPU4 83 aa19.32■□□□□ 0.68
CBX4-201ENST00000269397 ITPR3Q14573 2671 aa19.31■□□□□ 0.68
CBX4-201ENST00000269397 TRAV25A0A0B4J276 109 aa19.31■□□□□ 0.68
CBX4-201ENST00000269397 IGHV3OR16-9A0A0B4J2B5 98 aa19.28■□□□□ 0.68
CBX4-201ENST00000269397 OR13C6PQ8NH95 151 aa19.28■□□□□ 0.68
CBX4-201ENST00000269397 PAX4O43316 350 aa19.27■□□□□ 0.67
CBX4-201ENST00000269397 SLPIP03973 132 aa19.27■□□□□ 0.67
CBX4-201ENST00000269397 C9orf153Q5TBE3 101 aa19.27■□□□□ 0.67
CBX4-201ENST00000269397 FAM110AQ9BQ89 295 aa19.27■□□□□ 0.67
CBX4-201ENST00000269397 APCP25054 2843 aa19.26■□□□□ 0.67
CBX4-201ENST00000269397 LECT2O14960 151 aa19.26■□□□□ 0.67
CBX4-201ENST00000269397 C16orf74Q96GX8 76 aa19.25■□□□□ 0.67
CBX4-201ENST00000269397 TRBV6-4A0A1B0GX49 114 aa19.25■□□□□ 0.67
CBX4-201ENST00000269397 TRBV6-8A0A0A6YYG3 113 aa19.24■□□□□ 0.67
CBX4-201ENST00000269397 PPDPFQ9H3Y8 114 aa19.24■□□□□ 0.67
CBX4-201ENST00000269397 C3orf22Q8N5N4 141 aa19.24■□□□□ 0.67
CBX4-201ENST00000269397 DNAJC9-AS1A6NH13 148 aa19.23■□□□□ 0.67
CBX4-201ENST00000269397 FLNAP21333 2647 aaKnown RBP19.22■□□□□ 0.67
CBX4-201ENST00000269397 DEFB113Q30KQ7 82 aa19.22■□□□□ 0.67
CBX4-201ENST00000269397 NBEAL2Q6ZNJ1 2754 aa19.22■□□□□ 0.67
CBX4-201ENST00000269397 USP24Q9UPU5 2620 aa19.22■□□□□ 0.67
CBX4-201ENST00000269397 MTORP42345 2549 aa19.21■□□□□ 0.67
CBX4-201ENST00000269397 NCR3O14931 201 aa19.21■□□□□ 0.67
CBX4-201ENST00000269397 LRRC75A-AS1Q8N1F1 130 aa19.21■□□□□ 0.67
CBX4-201ENST00000269397 IGKV3D-7A0A0C4DH55 119 aa19.2■□□□□ 0.66
CBX4-201ENST00000269397 FHL2Q14192 279 aa19.2■□□□□ 0.66
CBX4-201ENST00000269397 TMEM126AQ9H061 195 aa19.2■□□□□ 0.66
CBX4-201ENST00000269397 A0A087WZ39 114 aa19.19■□□□□ 0.66
CBX4-201ENST00000269397 IBA57-AS1B1ANH7 110 aa19.19■□□□□ 0.66
CBX4-201ENST00000269397 GCN1Q92616 2671 aaKnown RBP19.19■□□□□ 0.66
CBX4-201ENST00000269397 CXCL5P42830 114 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 ESM1Q9NQ30 184 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 KLK5Q9Y337 293 aaPredicted RBP19.18■□□□□ 0.66
CBX4-201ENST00000269397 UBR5O95071 2799 aaPredicted RBP19.18■□□□□ 0.66
CBX4-201ENST00000269397 XCL1P47992 114 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 C6orf226Q5I0X4 101 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 CLPSL2Q6UWE3 100 aa19.18■□□□□ 0.66
CBX4-201ENST00000269397 OVOL2Q9BRP0 275 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms