RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
CCDC40-201ENST00000269318 A6NJY4 79 aa11.54□□□□□ -0.56
CCDC40-201ENST00000269318 RETNQ9HD89 108 aa11.54□□□□□ -0.56
CCDC40-201ENST00000269318 TMEM238C9JI98 176 aa11.52□□□□□ -0.56
CCDC40-201ENST00000269318 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.56
CCDC40-201ENST00000269318 A0A1B0GUV1 79 aa11.52□□□□□ -0.57
CCDC40-201ENST00000269318 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
CCDC40-201ENST00000269318 IGLL5B9A064 214 aa11.52□□□□□ -0.57
CCDC40-201ENST00000269318 NDUFA1O15239 70 aa11.51□□□□□ -0.57
CCDC40-201ENST00000269318 RBX1P62877 108 aa11.5□□□□□ -0.57
CCDC40-201ENST00000269318 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
CCDC40-201ENST00000269318 K7EP34 96 aa11.49□□□□□ -0.57
CCDC40-201ENST00000269318 HTN3P15516 51 aa11.49□□□□□ -0.57
CCDC40-201ENST00000269318 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
CCDC40-201ENST00000269318 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 FABP2P12104 132 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
CCDC40-201ENST00000269318 MUSTN1Q8IVN3 82 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 SPANXDQ9BXN6 97 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
CCDC40-201ENST00000269318 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 LINC00959A0A1B0GUT2 108 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 TIMM17BO60830 172 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 CFC1BP0CG36 223 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 CFC1P0CG37 223 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 GTF2H5Q6ZYL4 71 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 C11orf68Q9H3H3 251 aaKnown RBP11.47□□□□□ -0.57
CCDC40-201ENST00000269318 Q9H8V8 135 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
CCDC40-201ENST00000269318 A4D1N5 150 aa11.46□□□□□ -0.58
CCDC40-201ENST00000269318 APOMO95445 188 aa11.46□□□□□ -0.58
CCDC40-201ENST00000269318 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.58
CCDC40-201ENST00000269318 ICOSQ9Y6W8 199 aa11.46□□□□□ -0.58
CCDC40-201ENST00000269318 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
CCDC40-201ENST00000269318 MIAQ16674 131 aa11.45□□□□□ -0.58
CCDC40-201ENST00000269318 SH2D6Q7Z4S9 175 aa11.45□□□□□ -0.58
CCDC40-201ENST00000269318 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
CCDC40-201ENST00000269318 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
CCDC40-201ENST00000269318 A0A087WZ39 114 aa11.43□□□□□ -0.58
CCDC40-201ENST00000269318 TSPAN13O95857 204 aa11.43□□□□□ -0.58
CCDC40-201ENST00000269318 LELP1Q5T871 98 aa11.43□□□□□ -0.58
CCDC40-201ENST00000269318 Q8N3U1 123 aa11.42□□□□□ -0.58
CCDC40-201ENST00000269318 A0A0B4J2C4 111 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 PRSS2P07478 247 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 Q6ZTC4 211 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 H3BNG1 76 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 SS18Q15532 418 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
CCDC40-201ENST00000269318 HERV-K104P63124 156 aa11.4□□□□□ -0.58
CCDC40-201ENST00000269318 CLPSL2Q6UWE3 100 aa11.4□□□□□ -0.58
CCDC40-201ENST00000269318 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
CCDC40-201ENST00000269318 LINC00269Q8N2A0 174 aa11.4□□□□□ -0.58
CCDC40-201ENST00000269318 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-201ENST00000269318 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
CCDC40-201ENST00000269318 IFITM1P13164 125 aa11.39□□□□□ -0.59
CCDC40-201ENST00000269318 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
CCDC40-201ENST00000269318 XCL1P47992 114 aa11.39□□□□□ -0.59
CCDC40-201ENST00000269318 DAND5Q8N907 189 aa11.39□□□□□ -0.59
CCDC40-201ENST00000269318 PRB2P02812 416 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-201ENST00000269318 KRTAP21-3Q3LHN1 58 aa11.38□□□□□ -0.59
CCDC40-201ENST00000269318 LYPD5Q6UWN5 251 aa11.38□□□□□ -0.59
CCDC40-201ENST00000269318 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
CCDC40-201ENST00000269318 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
CCDC40-201ENST00000269318 ANGP03950 147 aaKnown RBP11.37□□□□□ -0.59
CCDC40-201ENST00000269318 NPC2P61916 151 aa11.37□□□□□ -0.59
CCDC40-201ENST00000269318 REG3AQ06141 175 aa11.37□□□□□ -0.59
CCDC40-201ENST00000269318 KPRPQ5T749 579 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-201ENST00000269318 NOTCH1P46531 2555 aa11.36□□□□□ -0.59
CCDC40-201ENST00000269318 K7EIL1 84 aa11.36□□□□□ -0.59
CCDC40-201ENST00000269318 LINC01561Q8N1V8 128 aa11.36□□□□□ -0.59
CCDC40-201ENST00000269318 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CCDC40-201ENST00000269318 LINC00308Q8TCZ7 52 aa11.36□□□□□ -0.59
CCDC40-201ENST00000269318 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
CCDC40-201ENST00000269318 MEIG1Q5JSS6 88 aa11.35□□□□□ -0.59
CCDC40-201ENST00000269318 CD164L2Q6UWJ8 174 aa11.35□□□□□ -0.59
CCDC40-201ENST00000269318 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
CCDC40-201ENST00000269318 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
CCDC40-201ENST00000269318 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
CCDC40-201ENST00000269318 SOSTDC1Q6X4U4 206 aa11.34□□□□□ -0.59
CCDC40-201ENST00000269318 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-201ENST00000269318 TM2D3Q9BRN9 247 aa11.34□□□□□ -0.59
CCDC40-201ENST00000269318 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
CCDC40-201ENST00000269318 SPATA25Q9BR10 227 aa11.33□□□□□ -0.6
CCDC40-201ENST00000269318 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
CCDC40-201ENST00000269318 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 H3BMG7 143 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 MDFIQ99750 246 aa11.32□□□□□ -0.6
CCDC40-201ENST00000269318 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
CCDC40-201ENST00000269318 Q8IZM0 81 aa11.31□□□□□ -0.6
CCDC40-201ENST00000269318 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
CCDC40-201ENST00000269318 COPS9Q8WXC6 57 aa11.3□□□□□ -0.6
CCDC40-201ENST00000269318 COX7A2LO14548 114 aa11.3□□□□□ -0.6
CCDC40-201ENST00000269318 FOXI1Q12951 378 aa11.3□□□□□ -0.6
CCDC40-201ENST00000269318 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms