RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 CITED1Q99966 193 aa13.56□□□□□ -0.24
CPNE7-201ENST00000268720 ANAPC13Q9BS18 74 aa13.56□□□□□ -0.24
CPNE7-201ENST00000268720 TRAV8-4A0A0B4J246 113 aa13.56□□□□□ -0.24
CPNE7-201ENST00000268720 LINC00242Q5T6M2 205 aa13.56□□□□□ -0.24
CPNE7-201ENST00000268720 J3QKU1 62 aa13.55□□□□□ -0.24
CPNE7-201ENST00000268720 M0QXV9 152 aa13.55□□□□□ -0.24
CPNE7-201ENST00000268720 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
CPNE7-201ENST00000268720 IGLV1-51P01701 117 aa13.54□□□□□ -0.24
CPNE7-201ENST00000268720 COX6CP09669 75 aa13.54□□□□□ -0.24
CPNE7-201ENST00000268720 SNCGO76070 127 aa13.54□□□□□ -0.24
CPNE7-201ENST00000268720 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
CPNE7-201ENST00000268720 ATRQ13535 2644 aa13.54□□□□□ -0.24
CPNE7-201ENST00000268720 TOMM7Q9P0U1 55 aa13.53□□□□□ -0.24
CPNE7-201ENST00000268720 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
CPNE7-201ENST00000268720 PLAC8L1A1L4L8 177 aa13.53□□□□□ -0.24
CPNE7-201ENST00000268720 SOSTDC1Q6X4U4 206 aa13.52□□□□□ -0.24
CPNE7-201ENST00000268720 A0A096LPF7 62 aa13.52□□□□□ -0.25
CPNE7-201ENST00000268720 NDUFA1O15239 70 aa13.52□□□□□ -0.25
CPNE7-201ENST00000268720 K7EQD1 137 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 HILS1P60008 231 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 GAGE2BQ13066 116 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 GAGE2EQ4V326 116 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 TTC32Q5I0X7 151 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 C15orf53Q8NAA6 179 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 GAGE2DQ9UEU5 116 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 TIRAPP58753 221 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 GAGE6Q13070 117 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 LINC00308Q8TCZ7 52 aa13.51□□□□□ -0.25
CPNE7-201ENST00000268720 LST1O00453 97 aa13.5□□□□□ -0.25
CPNE7-201ENST00000268720 NHLRC4P0CG21 123 aaPredicted RBP13.49□□□□□ -0.25
CPNE7-201ENST00000268720 RPL36AP83881 106 aaKnown RBP13.49□□□□□ -0.25
CPNE7-201ENST00000268720 RPL36ALQ969Q0 106 aaKnown RBP13.49□□□□□ -0.25
CPNE7-201ENST00000268720 IGLV5-45A0A087WSX0 123 aa13.49□□□□□ -0.25
CPNE7-201ENST00000268720 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
CPNE7-201ENST00000268720 PRIMA1Q86XR5 153 aa13.49□□□□□ -0.25
CPNE7-201ENST00000268720 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
CPNE7-201ENST00000268720 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
CPNE7-201ENST00000268720 SMIM1B2RUZ4 78 aa13.48□□□□□ -0.25
CPNE7-201ENST00000268720 DEFB130BP0DP73 79 aa13.48□□□□□ -0.25
CPNE7-201ENST00000268720 DEFB130AP0DP74 79 aa13.48□□□□□ -0.25
CPNE7-201ENST00000268720 CIRBPQ14011 172 aaKnown RBP13.48□□□□□ -0.25
CPNE7-201ENST00000268720 TIMM17BO60830 172 aa13.47□□□□□ -0.25
CPNE7-201ENST00000268720 IFITM1P13164 125 aa13.47□□□□□ -0.25
CPNE7-201ENST00000268720 HERVK_113P63121 156 aa13.47□□□□□ -0.25
CPNE7-201ENST00000268720 DAZ2Q13117 558 aaKnown RBP13.47□□□□□ -0.25
CPNE7-201ENST00000268720 IGLV5-39A0A0G2JS06 123 aa13.46□□□□□ -0.25
CPNE7-201ENST00000268720 TRBV10-1A0A0K0K1A3 114 aa13.46□□□□□ -0.26
CPNE7-201ENST00000268720 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.26
CPNE7-201ENST00000268720 H3BT86 120 aa13.45□□□□□ -0.26
CPNE7-201ENST00000268720 DEFB4AO15263 64 aa13.45□□□□□ -0.26
CPNE7-201ENST00000268720 IGLV4-60A0A075B6I1 120 aa13.45□□□□□ -0.26
CPNE7-201ENST00000268720 NDUFV3P56181 108 aaKnown RBP13.45□□□□□ -0.26
CPNE7-201ENST00000268720 TEP1Q99973 2627 aaKnown RBP13.44□□□□□ -0.26
CPNE7-201ENST00000268720 C16orf74Q96GX8 76 aa13.44□□□□□ -0.26
CPNE7-201ENST00000268720 LINC01600Q96MT4 127 aa13.44□□□□□ -0.26
CPNE7-201ENST00000268720 UBE2L6O14933 153 aa13.44□□□□□ -0.26
CPNE7-201ENST00000268720 DAZ4Q86SG3 579 aaKnown RBP13.44□□□□□ -0.26
CPNE7-201ENST00000268720 DAZ3Q9NR90 486 aaKnown RBP13.44□□□□□ -0.26
CPNE7-201ENST00000268720 SS18L2Q9UHA2 77 aa13.44□□□□□ -0.26
CPNE7-201ENST00000268720 B5MCH6 92 aa13.43□□□□□ -0.26
CPNE7-201ENST00000268720 NSD1Q96L73 2696 aaPredicted RBP13.42□□□□□ -0.26
CPNE7-201ENST00000268720 TRGV4A0A0C4DH28 118 aa13.42□□□□□ -0.26
CPNE7-201ENST00000268720 FAM110AQ9BQ89 295 aa13.42□□□□□ -0.26
CPNE7-201ENST00000268720 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
CPNE7-201ENST00000268720 CMC4P56277 68 aaPredicted RBP13.42□□□□□ -0.26
CPNE7-201ENST00000268720 C5orf38Q86SI9 138 aa13.42□□□□□ -0.26
CPNE7-201ENST00000268720 PKD1L1Q8TDX9 2849 aa13.41□□□□□ -0.26
CPNE7-201ENST00000268720 F5H768 121 aa13.4□□□□□ -0.26
CPNE7-201ENST00000268720 CCDC179H3BU77 68 aa13.4□□□□□ -0.26
CPNE7-201ENST00000268720 Q9HAA7 133 aa13.4□□□□□ -0.26
CPNE7-201ENST00000268720 PFN2P35080 140 aa13.39□□□□□ -0.27
CPNE7-201ENST00000268720 CHCHD5Q9BSY4 110 aa13.39□□□□□ -0.27
CPNE7-201ENST00000268720 CSDC2Q9Y534 153 aaKnown RBP13.39□□□□□ -0.27
CPNE7-201ENST00000268720 LY6G6DO95868 133 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 Q8N3U1 123 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 OVOL2Q9BRP0 275 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 COX7A2LO14548 114 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 PF4P02776 101 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 FAM218AQ96MZ4 157 aa13.38□□□□□ -0.27
CPNE7-201ENST00000268720 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
CPNE7-201ENST00000268720 LINC00482Q8N8I6 264 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 TRBV6-4A0A1B0GX49 114 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 FHL2Q14192 279 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 HIVEP1P15822 2718 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 SHISA2Q6UWI4 295 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 MIR7-3HGQ8N6C7 128 aa13.36□□□□□ -0.27
CPNE7-201ENST00000268720 FAM19A3Q7Z5A8 133 aa13.34□□□□□ -0.27
CPNE7-201ENST00000268720 DEFB121Q5J5C9 76 aa13.33□□□□□ -0.28
CPNE7-201ENST00000268720 XCL1P47992 114 aa13.33□□□□□ -0.28
CPNE7-201ENST00000268720 LINC00158P58513 81 aa13.32□□□□□ -0.28
CPNE7-201ENST00000268720 C3orf56Q8N813 242 aa13.32□□□□□ -0.28
CPNE7-201ENST00000268720 BAALC-AS2P0C853 105 aa13.32□□□□□ -0.28
CPNE7-201ENST00000268720 INAFM1C9JVW0 142 aa13.31□□□□□ -0.28
CPNE7-201ENST00000268720 Q6Q795 121 aa13.31□□□□□ -0.28
CPNE7-201ENST00000268720 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
CPNE7-201ENST00000268720 IGLV10-54A0A075B6I4 117 aa13.3□□□□□ -0.28
CPNE7-201ENST00000268720 ATP5G1P05496 136 aa13.3□□□□□ -0.28
CPNE7-201ENST00000268720 SMCR5Q8TEV8 140 aa13.3□□□□□ -0.28
CPNE7-201ENST00000268720 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms