RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CCL18P55774 89 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 F8WEM9 126 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 SPTBN4Q9H254 2564 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 A0A087WYN8 130 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
CASC3-201ENST00000264645 COL4A2P08572 1712 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 TRIOO75962 3097 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 LINC00315P59091 139 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 DOPEY1Q5JWR5 2465 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 PRUNE2Q8WUY3 3088 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 MTORP42345 2549 aa10.98□□□□□ -0.65
CASC3-201ENST00000264645 NDUFC2-KCTD14E9PQ53 114 aa10.97□□□□□ -0.65
CASC3-201ENST00000264645 Q8N2B8 174 aa10.97□□□□□ -0.65
CASC3-201ENST00000264645 CCL24O00175 119 aa10.97□□□□□ -0.65
CASC3-201ENST00000264645 DNAH14Q0VDD8 3507 aa10.97□□□□□ -0.65
CASC3-201ENST00000264645 POLQO75417 2590 aa10.96□□□□□ -0.65
CASC3-201ENST00000264645 CHCHD7Q9BUK0 85 aa10.96□□□□□ -0.65
CASC3-201ENST00000264645 RPL28P46779 137 aaKnown RBP10.96□□□□□ -0.65
CASC3-201ENST00000264645 KIR2DL5BQ8NHK3 375 aa10.96□□□□□ -0.66
CASC3-201ENST00000264645 SPAG11BQ08648 103 aa10.95□□□□□ -0.66
CASC3-201ENST00000264645 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
CASC3-201ENST00000264645 PDE6GP18545 87 aa10.95□□□□□ -0.66
CASC3-201ENST00000264645 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
CASC3-201ENST00000264645 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
CASC3-201ENST00000264645 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
CASC3-201ENST00000264645 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
CASC3-201ENST00000264645 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
CASC3-201ENST00000264645 HILS1P60008 231 aa10.94□□□□□ -0.66
CASC3-201ENST00000264645 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
CASC3-201ENST00000264645 V9GYY9 64 aa10.93□□□□□ -0.66
CASC3-201ENST00000264645 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
CASC3-201ENST00000264645 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 CCKP06307 115 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 Q6ZQY7 126 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 J3QLI3 93 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 CRYGAP11844 174 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 Q6ZSN1 163 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 CAMK2N2Q96S95 79 aa10.92□□□□□ -0.66
CASC3-201ENST00000264645 SMIM26A0A096LP01 95 aa10.91□□□□□ -0.66
CASC3-201ENST00000264645 C4orf26Q17RF5 130 aa10.91□□□□□ -0.66
CASC3-201ENST00000264645 TMEM89A2RUT3 159 aa10.91□□□□□ -0.66
CASC3-201ENST00000264645 BPY2O14599 106 aa10.91□□□□□ -0.66
CASC3-201ENST00000264645 DEFB4AO15263 64 aa10.9□□□□□ -0.67
CASC3-201ENST00000264645 CDSNQ15517 529 aa10.9□□□□□ -0.67
CASC3-201ENST00000264645 TRBV6-8A0A0A6YYG3 113 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
CASC3-201ENST00000264645 LINC00337Q8N6G1 96 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 SOSTDC1Q6X4U4 206 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 CELSR3Q9NYQ7 3312 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 ZFYVE26Q68DK2 2539 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 XAGE1AQ9HD64 81 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 KLK12Q9UKR0 248 aa10.89□□□□□ -0.67
CASC3-201ENST00000264645 COX7BP24311 80 aa10.88□□□□□ -0.67
CASC3-201ENST00000264645 SERP1Q9Y6X1 66 aa10.88□□□□□ -0.67
CASC3-201ENST00000264645 IGLV1-40P01703 118 aa10.88□□□□□ -0.67
CASC3-201ENST00000264645 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
CASC3-201ENST00000264645 FAM218AQ96MZ4 157 aa10.87□□□□□ -0.67
CASC3-201ENST00000264645 Q9UF83 564 aa10.87□□□□□ -0.67
CASC3-201ENST00000264645 TRAV7A0A075B6U4 112 aa10.87□□□□□ -0.67
CASC3-201ENST00000264645 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
CASC3-201ENST00000264645 LRRK2Q5S007 2527 aa10.86□□□□□ -0.67
CASC3-201ENST00000264645 NDUFC1O43677 76 aa10.86□□□□□ -0.67
CASC3-201ENST00000264645 NTM-AS1Q6ZSK4 140 aa10.86□□□□□ -0.67
CASC3-201ENST00000264645 Q96MF0 132 aa10.86□□□□□ -0.67
CASC3-201ENST00000264645 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
CASC3-201ENST00000264645 H3BQ85 93 aa10.85□□□□□ -0.67
CASC3-201ENST00000264645 CHCHD10Q8WYQ3 142 aaPredicted RBP10.85□□□□□ -0.67
CASC3-201ENST00000264645 MUC4Q99102 2169 aa10.84□□□□□ -0.67
CASC3-201ENST00000264645 VCANP13611 3396 aa10.84□□□□□ -0.67
CASC3-201ENST00000264645 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
CASC3-201ENST00000264645 SMCR5Q8TEV8 140 aa10.84□□□□□ -0.67
CASC3-201ENST00000264645 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
CASC3-201ENST00000264645 MIFP14174 115 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 PRR4Q16378 134 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 C18orf65Q6ZTR6 163 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 WDFY4Q6ZS81 3184 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 C3orf84H3BNL1 204 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 Q8N814 137 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 TRANK1O15050 2925 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 REG3AQ06141 175 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 RMI2Q96E14 147 aa10.83□□□□□ -0.68
CASC3-201ENST00000264645 IGKV2D-24A0A075B6R9 120 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 C19orf84I3L1E1 186 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
CASC3-201ENST00000264645 MP68P56378 58 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 Q8N3U1 123 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 SPTSSBQ8NFR3 76 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 LITAFQ99732 161 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 LAMA1P25391 3075 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 UBE2BP63146 152 aa10.82□□□□□ -0.68
CASC3-201ENST00000264645 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
CASC3-201ENST00000264645 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
CASC3-201ENST00000264645 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
CASC3-201ENST00000264645 DSPP15924 2871 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms