RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
CTCF-201ENST00000264010 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
CTCF-201ENST00000264010 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
CTCF-201ENST00000264010 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
CTCF-201ENST00000264010 Q9H8V8 135 aa11.88□□□□□ -0.51
CTCF-201ENST00000264010 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
CTCF-201ENST00000264010 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
CTCF-201ENST00000264010 A0A087WVE0 104 aa11.87□□□□□ -0.51
CTCF-201ENST00000264010 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
CTCF-201ENST00000264010 C16orf74Q96GX8 76 aa11.86□□□□□ -0.51
CTCF-201ENST00000264010 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
CTCF-201ENST00000264010 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
CTCF-201ENST00000264010 K7EQD1 137 aa11.86□□□□□ -0.51
CTCF-201ENST00000264010 CFAP46Q8IYW2 2715 aa11.85□□□□□ -0.51
CTCF-201ENST00000264010 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
CTCF-201ENST00000264010 ATP5G1P05496 136 aa11.85□□□□□ -0.51
CTCF-201ENST00000264010 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
CTCF-201ENST00000264010 COX7CP15954 63 aa11.85□□□□□ -0.51
CTCF-201ENST00000264010 A8MZ25 164 aa11.84□□□□□ -0.51
CTCF-201ENST00000264010 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
CTCF-201ENST00000264010 MTORP42345 2549 aa11.84□□□□□ -0.51
CTCF-201ENST00000264010 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
CTCF-201ENST00000264010 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
CTCF-201ENST00000264010 TMEM258P61165 79 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 DEFB130BP0DP73 79 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 DEFB130AP0DP74 79 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 Q6ZTI0 123 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 WFDC9Q8NEX5 89 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 MUC4Q99102 2169 aa11.83□□□□□ -0.52
CTCF-201ENST00000264010 FHL3Q13643 280 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 C1orf195Q5TG92 126 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 SNURFQ9Y675 71 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 ITPR1Q14643 2758 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 FAM236DA0A1B0GTK5 79 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 FAM236CP0DP71 79 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 LINC00467Q9BRT7 94 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 ACANP16112 2415 aa11.82□□□□□ -0.52
CTCF-201ENST00000264010 NDUFC2O95298 119 aa11.81□□□□□ -0.52
CTCF-201ENST00000264010 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
CTCF-201ENST00000264010 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
CTCF-201ENST00000264010 PRO0461Q9UI25 63 aa11.81□□□□□ -0.52
CTCF-201ENST00000264010 HILS1P60008 231 aa11.81□□□□□ -0.52
CTCF-201ENST00000264010 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
CTCF-201ENST00000264010 LECT2O14960 151 aa11.8□□□□□ -0.52
CTCF-201ENST00000264010 C16orf95Q9H693 158 aa11.8□□□□□ -0.52
CTCF-201ENST00000264010 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
CTCF-201ENST00000264010 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
CTCF-201ENST00000264010 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
CTCF-201ENST00000264010 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
CTCF-201ENST00000264010 USP17L23D6RBM5 183 aa11.79□□□□□ -0.52
CTCF-201ENST00000264010 H7C423 109 aa11.79□□□□□ -0.52
CTCF-201ENST00000264010 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
CTCF-201ENST00000264010 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
CTCF-201ENST00000264010 A8MTW9 85 aa11.78□□□□□ -0.52
CTCF-201ENST00000264010 SLPIP03973 132 aa11.77□□□□□ -0.53
CTCF-201ENST00000264010 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
CTCF-201ENST00000264010 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.53
CTCF-201ENST00000264010 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
CTCF-201ENST00000264010 C11orf72Q8NBR9 251 aa11.77□□□□□ -0.53
CTCF-201ENST00000264010 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.53
CTCF-201ENST00000264010 UBE2D1P51668 147 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 Q6ZSN1 163 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 VSIG2Q96IQ7 327 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 UBE2D3P61077 147 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 UBE2D2P62837 147 aa11.76□□□□□ -0.53
CTCF-201ENST00000264010 SPTSSBQ8NFR3 76 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 SPANXCQ9NY87 97 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 MALP21145 153 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
CTCF-201ENST00000264010 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 TSPEAR-AS2P59090 65 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 SERP2Q8N6R1 65 aa11.75□□□□□ -0.53
CTCF-201ENST00000264010 Q6Q795 121 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 RETNQ9HD89 108 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 AMELXQ99217 191 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 CHCHD7Q9BUK0 85 aa11.74□□□□□ -0.53
CTCF-201ENST00000264010 C9orf66Q5T8R8 295 aa11.73□□□□□ -0.53
CTCF-201ENST00000264010 RPL18AQ02543 176 aaKnown RBP11.73□□□□□ -0.53
CTCF-201ENST00000264010 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 CDKN2A-AS1Q9UH64 79 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 NCR3O14931 201 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 TIRAPP58753 221 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 CELSR2Q9HCU4 2923 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 F8P00451 2351 aa11.72□□□□□ -0.53
CTCF-201ENST00000264010 TIMM17BO60830 172 aa11.71□□□□□ -0.53
CTCF-201ENST00000264010 SEC61GP60059 68 aa11.71□□□□□ -0.53
CTCF-201ENST00000264010 CR1P17927 2039 aa11.71□□□□□ -0.53
CTCF-201ENST00000264010 LY6G6DO95868 133 aa11.7□□□□□ -0.54
CTCF-201ENST00000264010 APOC4P55056 127 aa11.7□□□□□ -0.54
CTCF-201ENST00000264010 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
CTCF-201ENST00000264010 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
CTCF-201ENST00000264010 HTN3P15516 51 aa11.69□□□□□ -0.54
CTCF-201ENST00000264010 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
CTCF-201ENST00000264010 SMR3AQ99954 134 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms