RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 UPK3BQ9BT76 320 aa8.77□□□□□ -1
CHMP2B-201ENST00000263780 JMJD7-PLA2G4BH0Y9G9 81 aa8.77□□□□□ -1.01
CHMP2B-201ENST00000263780 STHQ8IWL8 128 aa8.77□□□□□ -1.01
CHMP2B-201ENST00000263780 PAX4O43316 350 aa8.76□□□□□ -1.01
CHMP2B-201ENST00000263780 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
CHMP2B-201ENST00000263780 ASH1LQ9NR48 2969 aaKnown RBP8.76□□□□□ -1.01
CHMP2B-201ENST00000263780 AKAP6Q13023 2319 aa8.76□□□□□ -1.01
CHMP2B-201ENST00000263780 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
CHMP2B-201ENST00000263780 NCR3O14931 201 aa8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 C1orf158Q8N1D5 194 aa8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 TRAV25A0A0B4J276 109 aa8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 C9orf129Q5T035 196 aaKnown RBP8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 C4orf3Q8WVX3 66 aa8.75□□□□□ -1.01
CHMP2B-201ENST00000263780 TRBV6-4A0A1B0GX49 114 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 DEFB136Q30KP8 78 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 Q6ZTI0 123 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 SVEP1Q4LDE5 3571 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 LY6G6DO95868 133 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 Q6YL49 198 aa8.74□□□□□ -1.01
CHMP2B-201ENST00000263780 A0A087WZ39 114 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 NDUFC2O95298 119 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 A0A087WVE0 104 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 WIPF1O43516 503 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
CHMP2B-201ENST00000263780 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
CHMP2B-201ENST00000263780 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
CHMP2B-201ENST00000263780 TMEM256-PLSCR3K7ERE1 68 aa8.72□□□□□ -1.01
CHMP2B-201ENST00000263780 PFN2P35080 140 aa8.72□□□□□ -1.01
CHMP2B-201ENST00000263780 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.72□□□□□ -1.012e-6■■□□□ 13.9
CHMP2B-201ENST00000263780 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
CHMP2B-201ENST00000263780 GNLYP22749 145 aa8.71□□□□□ -1.01
CHMP2B-201ENST00000263780 C18orf65Q6ZTR6 163 aa8.71□□□□□ -1.01
CHMP2B-201ENST00000263780 CREBBPQ92793 2442 aa8.71□□□□□ -1.01
CHMP2B-201ENST00000263780 C11orf44Q8N8P7 122 aa8.71□□□□□ -1.02
CHMP2B-201ENST00000263780 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
CHMP2B-201ENST00000263780 CEP295Q9C0D2 2601 aa8.71□□□□□ -1.02
CHMP2B-201ENST00000263780 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
CHMP2B-201ENST00000263780 SLPIP03973 132 aa8.7□□□□□ -1.02
CHMP2B-201ENST00000263780 ODF3L2Q3SX64 289 aa8.7□□□□□ -1.02
CHMP2B-201ENST00000263780 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
CHMP2B-201ENST00000263780 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
CHMP2B-201ENST00000263780 TRGV2A0A075B6R0 118 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 BCE1O60756 84 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 KHDC1LQ5JSQ8 128 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 UBL5Q9BZL1 73 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 A0A1W2PRX2 142 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 GHRHP01286 108 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 CMC4P56277 68 aaPredicted RBP8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 RELNP78509 3460 aa8.69□□□□□ -1.02
CHMP2B-201ENST00000263780 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
CHMP2B-201ENST00000263780 Q8N814 137 aa8.68□□□□□ -1.02
CHMP2B-201ENST00000263780 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
CHMP2B-201ENST00000263780 SS18Q15532 418 aa8.67□□□□□ -1.02
CHMP2B-201ENST00000263780 DSCR8Q96T75 97 aa8.67□□□□□ -1.02
CHMP2B-201ENST00000263780 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
CHMP2B-201ENST00000263780 FSHBP01225 129 aa8.67□□□□□ -1.02
CHMP2B-201ENST00000263780 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
CHMP2B-201ENST00000263780 Q8IZM0 81 aa8.66□□□□□ -1.02
CHMP2B-201ENST00000263780 ATRXP46100 2492 aa8.65□□□□□ -1.02
CHMP2B-201ENST00000263780 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.02
CHMP2B-201ENST00000263780 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
CHMP2B-201ENST00000263780 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
CHMP2B-201ENST00000263780 FHL2Q14192 279 aa8.64□□□□□ -1.03
CHMP2B-201ENST00000263780 ENHOQ6UWT2 76 aa8.64□□□□□ -1.03
CHMP2B-201ENST00000263780 ZFHX3Q15911 3703 aa8.63□□□□□ -1.03
CHMP2B-201ENST00000263780 HILS1P60008 231 aa8.63□□□□□ -1.03
CHMP2B-201ENST00000263780 COX17Q14061 63 aa8.63□□□□□ -1.03
CHMP2B-201ENST00000263780 A0A096LNT2 108 aa8.62□□□□□ -1.03
CHMP2B-201ENST00000263780 MUC6Q6W4X9 2439 aa8.62□□□□□ -1.03
CHMP2B-201ENST00000263780 H3BQ85 93 aa8.62□□□□□ -1.03
CHMP2B-201ENST00000263780 OXTP01178 125 aa8.62□□□□□ -1.03
CHMP2B-201ENST00000263780 FAM19A1Q7Z5A9 133 aa8.62□□□□□ -1.03
CHMP2B-201ENST00000263780 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 FAM236DA0A1B0GTK5 79 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 FAM236CP0DP71 79 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 XCL1P47992 114 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 C11orf68Q9H3H3 251 aaKnown RBP8.61□□□□□ -1.03
CHMP2B-201ENST00000263780 CELSR1Q9NYQ6 3014 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 Q5XG85 94 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 A0A1B0GUV1 79 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
CHMP2B-201ENST00000263780 PDE6GP18545 87 aa8.59□□□□□ -1.03
CHMP2B-201ENST00000263780 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
CHMP2B-201ENST00000263780 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
CHMP2B-201ENST00000263780 IGF2RP11717 2491 aa8.59□□□□□ -1.03
CHMP2B-201ENST00000263780 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
CHMP2B-201ENST00000263780 CCL24O00175 119 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 IGHV4-31P0DP07 118 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms