RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
SHANK3-201ENST00000262795 RPL28P46779 137 aaKnown RBP11.62□□□□□ -0.55
SHANK3-201ENST00000262795 MAPKAPK5-AS1Q8N8E1 139 aa11.62□□□□□ -0.55
SHANK3-201ENST00000262795 PRYO14603 147 aa11.62□□□□□ -0.55
SHANK3-201ENST00000262795 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
SHANK3-201ENST00000262795 Q6ZSR3 168 aa11.61□□□□□ -0.55
SHANK3-201ENST00000262795 PSPHP1O15172 72 aa11.6□□□□□ -0.55
SHANK3-201ENST00000262795 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
SHANK3-201ENST00000262795 CTRLP40313 264 aa11.6□□□□□ -0.55
SHANK3-201ENST00000262795 MDFIQ99750 246 aa11.6□□□□□ -0.55
SHANK3-201ENST00000262795 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
SHANK3-201ENST00000262795 MUC4Q99102 2169 aa11.59□□□□□ -0.55
SHANK3-201ENST00000262795 CCKP06307 115 aa11.59□□□□□ -0.55
SHANK3-201ENST00000262795 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
SHANK3-201ENST00000262795 C19orf71A6NCJ1 209 aa11.59□□□□□ -0.55
SHANK3-201ENST00000262795 SPINK1P00995 79 aa11.58□□□□□ -0.56
SHANK3-201ENST00000262795 C16orf90A8MZG2 172 aa11.58□□□□□ -0.56
SHANK3-201ENST00000262795 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.56
SHANK3-201ENST00000262795 H7C423 109 aa11.58□□□□□ -0.56
SHANK3-201ENST00000262795 C9orf116Q5BN46 136 aaPredicted RBP11.57□□□□□ -0.56
SHANK3-201ENST00000262795 ODF3Q96PU9 254 aa11.57□□□□□ -0.56
SHANK3-201ENST00000262795 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
SHANK3-201ENST00000262795 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
SHANK3-201ENST00000262795 ABCA2Q9BZC7 2435 aa11.57□□□□□ -0.56
SHANK3-201ENST00000262795 A0A0J9YXY3 114 aa11.57□□□□□ -0.56
SHANK3-201ENST00000262795 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 ZNF295-AS1Q8N0V1 137 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 NHLRC4P0CG21 123 aaPredicted RBP11.56□□□□□ -0.56
SHANK3-201ENST00000262795 COX6A2Q02221 97 aa11.56□□□□□ -0.56
SHANK3-201ENST00000262795 MRPS12O15235 138 aaKnown RBP11.55□□□□□ -0.56
SHANK3-201ENST00000262795 M0R378 163 aa11.54□□□□□ -0.56
SHANK3-201ENST00000262795 NAV3Q8IVL0 2385 aa11.54□□□□□ -0.56
SHANK3-201ENST00000262795 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
SHANK3-201ENST00000262795 ESRGQ1W209 222 aa11.54□□□□□ -0.56
SHANK3-201ENST00000262795 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
SHANK3-201ENST00000262795 REG3GQ6UW15 175 aa11.53□□□□□ -0.56
SHANK3-201ENST00000262795 TRIAP1O43715 76 aa11.52□□□□□ -0.57
SHANK3-201ENST00000262795 CYSRT1A8MQ03 144 aa11.52□□□□□ -0.57
SHANK3-201ENST00000262795 M0QY20 66 aa11.52□□□□□ -0.57
SHANK3-201ENST00000262795 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
SHANK3-201ENST00000262795 TRBV6-5A0A0K0K1A5 114 aa11.51□□□□□ -0.57
SHANK3-201ENST00000262795 BEAN1Q3B7T3 259 aa11.5□□□□□ -0.57
SHANK3-201ENST00000262795 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
SHANK3-201ENST00000262795 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
SHANK3-201ENST00000262795 DHRS4-AS1Q9P1J3 65 aa11.5□□□□□ -0.57
SHANK3-201ENST00000262795 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 FHL3Q13643 280 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 PRR9Q5T870 116 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 Q8N9L7 120 aa11.49□□□□□ -0.57
SHANK3-201ENST00000262795 DEFB116Q30KQ4 102 aa11.48□□□□□ -0.57
SHANK3-201ENST00000262795 Q6ZPA2 131 aa11.48□□□□□ -0.57
SHANK3-201ENST00000262795 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
SHANK3-201ENST00000262795 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
SHANK3-201ENST00000262795 HCFC1P51610 2035 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 VPREB1P12018 145 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 ATP5EP56381 51 aaPredicted RBP11.47□□□□□ -0.57
SHANK3-201ENST00000262795 Q6ZQY7 126 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 TTC28Q96AY4 2481 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
SHANK3-201ENST00000262795 ACACBO00763 2458 aa11.46□□□□□ -0.57
SHANK3-201ENST00000262795 EBI3Q14213 229 aa11.46□□□□□ -0.57
SHANK3-201ENST00000262795 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 ODF3L2Q3SX64 289 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 PDE6GP18545 87 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 A0A1W2PPR1 153 aa11.45□□□□□ -0.58
SHANK3-201ENST00000262795 CRIP2P52943 208 aaPredicted RBP11.44□□□□□ -0.58
SHANK3-201ENST00000262795 ADAMTS20P59510 1910 aa11.44□□□□□ -0.58
SHANK3-201ENST00000262795 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
SHANK3-201ENST00000262795 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
SHANK3-201ENST00000262795 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
SHANK3-201ENST00000262795 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
SHANK3-201ENST00000262795 CRIP1P50238 77 aa11.44□□□□□ -0.58
SHANK3-201ENST00000262795 COX7CP15954 63 aa11.43□□□□□ -0.58
SHANK3-201ENST00000262795 LST1O00453 97 aa11.43□□□□□ -0.58
SHANK3-201ENST00000262795 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
SHANK3-201ENST00000262795 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
SHANK3-201ENST00000262795 NDUFC1O43677 76 aa11.43□□□□□ -0.58
SHANK3-201ENST00000262795 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
SHANK3-201ENST00000262795 SBSPONQ8IVN8 264 aa11.42□□□□□ -0.58
SHANK3-201ENST00000262795 SMIM26A0A096LP01 95 aa11.42□□□□□ -0.58
SHANK3-201ENST00000262795 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
SHANK3-201ENST00000262795 TSHBP01222 138 aa11.41□□□□□ -0.58
SHANK3-201ENST00000262795 PRLHP81277 87 aa11.41□□□□□ -0.58
SHANK3-201ENST00000262795 ZNF73O43830 326 aaPredicted RBP11.4□□□□□ -0.58
SHANK3-201ENST00000262795 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
SHANK3-201ENST00000262795 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.59
SHANK3-201ENST00000262795 RNF185Q96GF1 192 aa11.4□□□□□ -0.59
SHANK3-201ENST00000262795 Q9BRP9 147 aa11.4□□□□□ -0.59
SHANK3-201ENST00000262795 GAS8-AS1O95177 125 aa11.39□□□□□ -0.59
SHANK3-201ENST00000262795 CRYGAP11844 174 aa11.38□□□□□ -0.59
SHANK3-201ENST00000262795 AGRNO00468 2067 aa11.38□□□□□ -0.59
SHANK3-201ENST00000262795 LYPD5Q6UWN5 251 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms