RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TINCRA0A1B0GVN0 87 aa16.2■□□□□ 0.18
MCF2L-201ENST00000261963 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-201ENST00000261963 IGHV3-38A0A0C4DH36 116 aa16.2■□□□□ 0.18
MCF2L-201ENST00000261963 IGKV2-29A2NJV5 120 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-201ENST00000261963 IL17DQ8TAD2 202 aa16.2■□□□□ 0.18
MCF2L-201ENST00000261963 SMCR5Q8TEV8 140 aa16.2■□□□□ 0.18
MCF2L-201ENST00000261963 IGHV3OR16-12A0A075B7B8 117 aa16.18■□□□□ 0.18
MCF2L-201ENST00000261963 JMJD1CQ15652 2540 aa16.18■□□□□ 0.18
MCF2L-201ENST00000261963 ATP5G1P05496 136 aa16.18■□□□□ 0.18
MCF2L-201ENST00000261963 DAND5Q8N907 189 aa16.18■□□□□ 0.18
MCF2L-201ENST00000261963 LINC00526Q96FQ7 95 aa16.18■□□□□ 0.18
MCF2L-201ENST00000261963 SETXQ7Z333 2677 aaKnown RBP16.18■□□□□ 0.18
MCF2L-201ENST00000261963 ITPR2Q14571 2701 aa16.17■□□□□ 0.18
MCF2L-201ENST00000261963 LINC01006Q8NI28 216 aa16.17■□□□□ 0.18
MCF2L-201ENST00000261963 COX7A2LO14548 114 aa16.16■□□□□ 0.18
MCF2L-201ENST00000261963 HERVK_113P63121 156 aa16.16■□□□□ 0.18
MCF2L-201ENST00000261963 CIRBPQ14011 172 aaKnown RBP16.14■□□□□ 0.17
MCF2L-201ENST00000261963 CSDC2Q9Y534 153 aaKnown RBP16.14■□□□□ 0.17
MCF2L-201ENST00000261963 TRGV1A0A0A0MS02 117 aa16.14■□□□□ 0.17
MCF2L-201ENST00000261963 NOTCH3Q9UM47 2321 aa16.13■□□□□ 0.17
MCF2L-201ENST00000261963 CXCL5P42830 114 aa16.13■□□□□ 0.17
MCF2L-201ENST00000261963 RNASE1P07998 156 aaKnown RBP16.13■□□□□ 0.17
MCF2L-201ENST00000261963 SDIM1Q6ZPB5 146 aa16.13■□□□□ 0.17
MCF2L-201ENST00000261963 C16orf95Q9H693 158 aa16.13■□□□□ 0.17
MCF2L-201ENST00000261963 DAZ2Q13117 558 aaKnown RBP16.12■□□□□ 0.17
MCF2L-201ENST00000261963 DAZ4Q86SG3 579 aaKnown RBP16.12■□□□□ 0.17
MCF2L-201ENST00000261963 DAZ3Q9NR90 486 aaKnown RBP16.12■□□□□ 0.17
MCF2L-201ENST00000261963 NDUFA1O15239 70 aa16.11■□□□□ 0.17
MCF2L-201ENST00000261963 GIG44P09565 113 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-201ENST00000261963 LOC107984640A0A0U1RRK4 108 aa16.1■□□□□ 0.17
MCF2L-201ENST00000261963 Q6ZTI0 123 aa16.1■□□□□ 0.17
MCF2L-201ENST00000261963 C5orf38Q86SI9 138 aa16.1■□□□□ 0.17
MCF2L-201ENST00000261963 LINC00308Q8TCZ7 52 aa16.1■□□□□ 0.17
MCF2L-201ENST00000261963 COX7CP15954 63 aa16.09■□□□□ 0.17
MCF2L-201ENST00000261963 J3KT08 172 aa16.09■□□□□ 0.17
MCF2L-201ENST00000261963 HELZ2Q9BYK8 2649 aaKnown RBP16.09■□□□□ 0.17
MCF2L-201ENST00000261963 BAALC-AS2P0C853 105 aa16.08■□□□□ 0.17
MCF2L-201ENST00000261963 WFDC10AQ9H1F0 79 aa16.08■□□□□ 0.17
MCF2L-201ENST00000261963 TRACP01848 142 aa16.08■□□□□ 0.16
MCF2L-201ENST00000261963 UNC79Q9P2D8 2635 aa16.07■□□□□ 0.16
MCF2L-201ENST00000261963 CDKN2A-AS1Q9UH64 79 aa16.07■□□□□ 0.16
MCF2L-201ENST00000261963 KLK5Q9Y337 293 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-201ENST00000261963 A0A1B0GX51 115 aa16.07■□□□□ 0.16
MCF2L-201ENST00000261963 PLA2G2AP14555 144 aa16.06■□□□□ 0.16
MCF2L-201ENST00000261963 C2CD3Q4AC94 2353 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 K7EQD1 137 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 C5orf47Q569G3 176 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-201ENST00000261963 C19orf73Q9NVV2 129 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 IGLV1-51P01701 117 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 TIRAPP58753 221 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 COPS9Q8WXC6 57 aa16.05■□□□□ 0.16
MCF2L-201ENST00000261963 GAGE2AQ6NT46 116 aa16.04■□□□□ 0.16
MCF2L-201ENST00000261963 NOP10Q9NPE3 64 aaKnown RBP16.04■□□□□ 0.16
MCF2L-201ENST00000261963 INAFM2P0DMQ5 153 aa16.04■□□□□ 0.16
MCF2L-201ENST00000261963 IGLV5-45A0A087WSX0 123 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 TRBV10-1A0A0K0K1A3 114 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 PLAC8L1A1L4L8 177 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 CRYGAP11844 174 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 NTM-AS1Q6ZSK4 140 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 C2orf48Q96LS8 159 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 Q9H8V8 135 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 J3QKU1 62 aa16.03■□□□□ 0.16
MCF2L-201ENST00000261963 A0A0U1RRA0 63 aa16.02■□□□□ 0.16
MCF2L-201ENST00000261963 RPL36AP83881 106 aaKnown RBP16.02■□□□□ 0.16
MCF2L-201ENST00000261963 DGAT2L7PQ6IED9 249 aa16.02■□□□□ 0.16
MCF2L-201ENST00000261963 RPL36ALQ969Q0 106 aaKnown RBP16.02■□□□□ 0.16
MCF2L-201ENST00000261963 CMC4P56277 68 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-201ENST00000261963 FAM222AQ5U5X8 452 aa16.02■□□□□ 0.15
MCF2L-201ENST00000261963 FAM19A5Q7Z5A7 132 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-201ENST00000261963 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-201ENST00000261963 C22orf24Q9Y442 160 aa16.02■□□□□ 0.15
MCF2L-201ENST00000261963 ATOX1O00244 68 aa16.01■□□□□ 0.15
MCF2L-201ENST00000261963 COX6A2Q02221 97 aa16.01■□□□□ 0.15
MCF2L-201ENST00000261963 RPL35AP18077 110 aaKnown RBP16■□□□□ 0.15
MCF2L-201ENST00000261963 SMIM9A6NGZ8 99 aa16■□□□□ 0.15
MCF2L-201ENST00000261963 HIST1H4AP62805 103 aaKnown RBP15.99■□□□□ 0.15
MCF2L-201ENST00000261963 SOSTDC1Q6X4U4 206 aa15.99■□□□□ 0.15
MCF2L-201ENST00000261963 HILS1P60008 231 aa15.99■□□□□ 0.15
MCF2L-201ENST00000261963 RPS28P62857 69 aaKnown RBP15.98■□□□□ 0.15
MCF2L-201ENST00000261963 CSNK1G2-AS1Q8NCQ2 148 aa15.98■□□□□ 0.15
MCF2L-201ENST00000261963 LINC00242Q5T6M2 205 aa15.98■□□□□ 0.15
MCF2L-201ENST00000261963 C16orf74Q96GX8 76 aa15.97■□□□□ 0.15
MCF2L-201ENST00000261963 FAM218AQ96MZ4 157 aa15.97■□□□□ 0.15
MCF2L-201ENST00000261963 IGLV5-39A0A0G2JS06 123 aa15.97■□□□□ 0.15
MCF2L-201ENST00000261963 FASNP49327 2511 aaKnown RBP15.95■□□□□ 0.14
MCF2L-201ENST00000261963 FAM19A3Q7Z5A8 133 aa15.95■□□□□ 0.14
MCF2L-201ENST00000261963 hADV29S1A0JD25 119 aa15.95■□□□□ 0.14
MCF2L-201ENST00000261963 MALP21145 153 aa15.95■□□□□ 0.14
MCF2L-201ENST00000261963 OR13C6PQ8NH95 151 aa15.93■□□□□ 0.14
MCF2L-201ENST00000261963 OVOL2Q9BRP0 275 aa15.93■□□□□ 0.14
MCF2L-201ENST00000261963 Q9HAA7 133 aa15.93■□□□□ 0.14
MCF2L-201ENST00000261963 CDC42SE2Q9NRR3 84 aa15.93■□□□□ 0.14
MCF2L-201ENST00000261963 TRGV2A0A075B6R0 118 aa15.92■□□□□ 0.14
MCF2L-201ENST00000261963 LOC100131303A0A0U1RQF7 123 aa15.92■□□□□ 0.14
MCF2L-201ENST00000261963 SMR3AQ99954 134 aa15.92■□□□□ 0.14
MCF2L-201ENST00000261963 TRAV13-1A0A0B4J241 112 aa15.92■□□□□ 0.14
MCF2L-201ENST00000261963 PRIMA1Q86XR5 153 aa15.92■□□□□ 0.14
MCF2L-201ENST00000261963 HIVEP2P31629 2446 aa15.91■□□□□ 0.14
MCF2L-201ENST00000261963 RPL18AQ02543 176 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms