RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FASNP49327 2511 aaKnown RBP11.9□□□□□ -0.51
SREBF1-201ENST00000261646 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
SREBF1-201ENST00000261646 C11orf71Q6IPW1 123 aa11.89□□□□□ -0.51
SREBF1-201ENST00000261646 Q96MF0 132 aa11.89□□□□□ -0.51
SREBF1-201ENST00000261646 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
SREBF1-201ENST00000261646 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
SREBF1-201ENST00000261646 LOC107984640A0A0U1RRK4 108 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 J3QLI3 93 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 CCL24O00175 119 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 A0A087WVE0 104 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 ESM1Q9NQ30 184 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 DMXL2Q8TDJ6 3036 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 LINC00526Q96FQ7 95 aa11.87□□□□□ -0.51
SREBF1-201ENST00000261646 KALRNO60229 2985 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 C16orf74Q96GX8 76 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
SREBF1-201ENST00000261646 CXCL5P42830 114 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 FHL3Q13643 280 aa11.85□□□□□ -0.51
SREBF1-201ENST00000261646 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
SREBF1-201ENST00000261646 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
SREBF1-201ENST00000261646 TMEM89A2RUT3 159 aa11.83□□□□□ -0.52
SREBF1-201ENST00000261646 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
SREBF1-201ENST00000261646 SMIM9A6NGZ8 99 aa11.83□□□□□ -0.52
SREBF1-201ENST00000261646 WFDC9Q8NEX5 89 aa11.83□□□□□ -0.52
SREBF1-201ENST00000261646 FAM19A5Q7Z5A7 132 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-201ENST00000261646 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
SREBF1-201ENST00000261646 AMELXQ99217 191 aa11.82□□□□□ -0.52
SREBF1-201ENST00000261646 IBA57-AS1B1ANH7 110 aa11.82□□□□□ -0.52
SREBF1-201ENST00000261646 BRK1Q8WUW1 75 aa11.82□□□□□ -0.52
SREBF1-201ENST00000261646 LINC00315P59091 139 aa11.81□□□□□ -0.52
SREBF1-201ENST00000261646 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
SREBF1-201ENST00000261646 IGHV4-28A0A0C4DH34 117 aa11.81□□□□□ -0.52
SREBF1-201ENST00000261646 SCXQ7RTU7 201 aa11.81□□□□□ -0.52
SREBF1-201ENST00000261646 PRB2P02812 416 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-201ENST00000261646 COX6A2Q02221 97 aa11.8□□□□□ -0.52
SREBF1-201ENST00000261646 HRCT1Q6UXD1 115 aa11.8□□□□□ -0.52
SREBF1-201ENST00000261646 NREPQ16612 68 aa11.8□□□□□ -0.52
SREBF1-201ENST00000261646 NKAPP1Q8N9T2 125 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 TACC2O95359 2948 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 TRBV7-7A0A0K0K1E9 115 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 C6orf99Q4VX62 202 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
SREBF1-201ENST00000261646 CCL18P55774 89 aa11.78□□□□□ -0.52
SREBF1-201ENST00000261646 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
SREBF1-201ENST00000261646 F8WEM9 126 aa11.78□□□□□ -0.52
SREBF1-201ENST00000261646 ATP5EP2Q5VTU8 51 aa11.78□□□□□ -0.52
SREBF1-201ENST00000261646 NDUFC2O95298 119 aa11.77□□□□□ -0.52
SREBF1-201ENST00000261646 IGLV1-40P01703 118 aa11.77□□□□□ -0.52
SREBF1-201ENST00000261646 ATMQ13315 3056 aa11.77□□□□□ -0.52
SREBF1-201ENST00000261646 AVPP01185 164 aa11.77□□□□□ -0.53
SREBF1-201ENST00000261646 SPAG11BQ08648 103 aa11.77□□□□□ -0.53
SREBF1-201ENST00000261646 Q6JHZ5 121 aa11.77□□□□□ -0.53
SREBF1-201ENST00000261646 SNURFQ9Y675 71 aa11.77□□□□□ -0.53
SREBF1-201ENST00000261646 DEFB114Q30KQ6 69 aa11.76□□□□□ -0.53
SREBF1-201ENST00000261646 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
SREBF1-201ENST00000261646 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
SREBF1-201ENST00000261646 CDC42SE2Q9NRR3 84 aa11.75□□□□□ -0.53
SREBF1-201ENST00000261646 MPLKIPQ8TAP9 179 aa11.75□□□□□ -0.53
SREBF1-201ENST00000261646 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-201ENST00000261646 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 A0A087WYN8 130 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 RPL28P46779 137 aaKnown RBP11.74□□□□□ -0.53
SREBF1-201ENST00000261646 Q6ZSN1 163 aa11.74□□□□□ -0.53
SREBF1-201ENST00000261646 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
SREBF1-201ENST00000261646 CAMK2N2Q96S95 79 aa11.73□□□□□ -0.53
SREBF1-201ENST00000261646 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
SREBF1-201ENST00000261646 DEFB4AO15263 64 aa11.73□□□□□ -0.53
SREBF1-201ENST00000261646 TRBV6-8A0A0A6YYG3 113 aa11.73□□□□□ -0.53
SREBF1-201ENST00000261646 Q8N2B8 174 aa11.73□□□□□ -0.53
SREBF1-201ENST00000261646 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-201ENST00000261646 PDE6GP18545 87 aa11.72□□□□□ -0.53
SREBF1-201ENST00000261646 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
SREBF1-201ENST00000261646 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
SREBF1-201ENST00000261646 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■■□ 20.2
SREBF1-201ENST00000261646 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
SREBF1-201ENST00000261646 C18orf65Q6ZTR6 163 aa11.71□□□□□ -0.54
SREBF1-201ENST00000261646 ASPMQ8IZT6 3477 aa11.7□□□□□ -0.54
SREBF1-201ENST00000261646 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
SREBF1-201ENST00000261646 PRO0255Q9UI72 69 aa11.69□□□□□ -0.54
SREBF1-201ENST00000261646 Q6ZQY7 126 aa11.68□□□□□ -0.54
SREBF1-201ENST00000261646 DMXL1Q9Y485 3027 aa11.67□□□□□ -0.54
SREBF1-201ENST00000261646 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-201ENST00000261646 XAGE1AQ9HD64 81 aa11.67□□□□□ -0.54
SREBF1-201ENST00000261646 Q9UF83 564 aa11.67□□□□□ -0.54
SREBF1-201ENST00000261646 CCKP06307 115 aa11.67□□□□□ -0.54
SREBF1-201ENST00000261646 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
SREBF1-201ENST00000261646 COX7BP24311 80 aa11.66□□□□□ -0.54
SREBF1-201ENST00000261646 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
SREBF1-201ENST00000261646 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
SREBF1-201ENST00000261646 FAM19A1Q7Z5A9 133 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 BPY2O14599 106 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms