RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DAZ2Q13117 558 aaKnown RBP6.43□□□□□ -1.38
CKAP2-201ENST00000258607 C6orf226Q5I0X4 101 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 DAZ4Q86SG3 579 aaKnown RBP6.43□□□□□ -1.38
CKAP2-201ENST00000258607 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 DAZ3Q9NR90 486 aaKnown RBP6.43□□□□□ -1.38
CKAP2-201ENST00000258607 TSPAN13O95857 204 aa6.42□□□□□ -1.38
CKAP2-201ENST00000258607 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
CKAP2-201ENST00000258607 CFC1P0CG37 223 aa6.42□□□□□ -1.38
CKAP2-201ENST00000258607 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
CKAP2-201ENST00000258607 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
CKAP2-201ENST00000258607 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 A6NJY4 79 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 LECT2O14960 151 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 SMAGPQ0VAQ4 97 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 FHL2Q14192 279 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 C9orf66Q5T8R8 295 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 TRAV4A0A0B4J268 109 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
CKAP2-201ENST00000258607 TRAV25A0A0B4J276 109 aa6.4□□□□□ -1.38
CKAP2-201ENST00000258607 MALP21145 153 aa6.4□□□□□ -1.38
CKAP2-201ENST00000258607 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
CKAP2-201ENST00000258607 NANOS2P60321 138 aaKnown RBP6.4□□□□□ -1.38
CKAP2-201ENST00000258607 TCL1BO95988 128 aa6.4□□□□□ -1.39
CKAP2-201ENST00000258607 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.39
CKAP2-201ENST00000258607 FAM104AQ969W3 186 aa6.4□□□□□ -1.39
CKAP2-201ENST00000258607 LEPROTO15243 131 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 UBE2D3P61077 147 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 UBE2D2P62837 147 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 PRO1854Q9UHT4 67 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 ZFAND6Q6FIF0 208 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 MIR7-3HGQ8N6C7 128 aa6.39□□□□□ -1.39
CKAP2-201ENST00000258607 TRBV6-8A0A0A6YYG3 113 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 K7ERU9 68 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 Q6ZTC4 211 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 X6R8D5 127 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 ATP5G1P05496 136 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 RBX1P62877 108 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 UBE2D1P51668 147 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 CSNK1G2-AS1Q8NCQ2 148 aa6.38□□□□□ -1.39
CKAP2-201ENST00000258607 TM2D2Q9BX73 214 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 SIVA1O15304 175 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 CIRBPQ14011 172 aaKnown RBP6.37□□□□□ -1.39
CKAP2-201ENST00000258607 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 SPANXA1Q9NS26 97 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 XAGE1AQ9HD64 81 aa6.37□□□□□ -1.39
CKAP2-201ENST00000258607 A0A0J9YWU9 116 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 CKS1BP61024 79 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 PRO0255Q9UI72 69 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 A8MTW9 85 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 HIGD1BQ9P298 99 aa6.36□□□□□ -1.39
CKAP2-201ENST00000258607 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 LINC01546A6NGU7 62 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 APOC4P55056 127 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 MRPS36P82909 103 aaKnown RBP6.35□□□□□ -1.39
CKAP2-201ENST00000258607 TRIAP1O43715 76 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 SLPIP03973 132 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 HERVK_113P63121 156 aa6.35□□□□□ -1.39
CKAP2-201ENST00000258607 MRPL52Q86TS9 123 aaKnown RBP6.34□□□□□ -1.39
CKAP2-201ENST00000258607 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
CKAP2-201ENST00000258607 AMELXQ99217 191 aa6.34□□□□□ -1.39
CKAP2-201ENST00000258607 CRYBA4P53673 196 aa6.34□□□□□ -1.39
CKAP2-201ENST00000258607 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.4
CKAP2-201ENST00000258607 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.4
CKAP2-201ENST00000258607 ANK2Q01484 3957 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 NCR3O14931 201 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 TINCRA0A1B0GVN0 87 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 EDA2RQ9HAV5 297 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
CKAP2-201ENST00000258607 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 TRBV6-4A0A1B0GX49 114 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 CRPP02741 224 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 REG3AQ06141 175 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 SS18Q15532 418 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 SRRM2Q9UQ35 2752 aaKnown RBP6.32□□□□□ -1.4
CKAP2-201ENST00000258607 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
CKAP2-201ENST00000258607 CHCHD10Q8WYQ3 142 aaPredicted RBP6.32□□□□□ -1.4
CKAP2-201ENST00000258607 SND1-IT1Q9HBX3 110 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 SLC25A20O43772 301 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 CITED1Q99966 193 aa6.31□□□□□ -1.4
CKAP2-201ENST00000258607 CBY1Q9Y3M2 126 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms