RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 A8MZ25 164 aa13.15□□□□□ -0.3
EFR3A-201ENST00000254624 BPY2O14599 106 aa13.15□□□□□ -0.3
EFR3A-201ENST00000254624 TRIAP1O43715 76 aa13.15□□□□□ -0.3
EFR3A-201ENST00000254624 RNASE8Q8TDE3 154 aaKnown RBP13.15□□□□□ -0.3
EFR3A-201ENST00000254624 LY6G6CO95867 125 aa13.15□□□□□ -0.3
EFR3A-201ENST00000254624 ZNF706Q9Y5V0 76 aaPredicted RBP13.15□□□□□ -0.3
EFR3A-201ENST00000254624 M0R2N4 97 aa13.14□□□□□ -0.31
EFR3A-201ENST00000254624 BEAN1Q3B7T3 259 aa13.14□□□□□ -0.31
EFR3A-201ENST00000254624 G3V4G9 280 aa13.14□□□□□ -0.31
EFR3A-201ENST00000254624 FHL2Q14192 279 aa13.13□□□□□ -0.31
EFR3A-201ENST00000254624 RETNQ9HD89 108 aa13.13□□□□□ -0.31
EFR3A-201ENST00000254624 CHKB-CPT1BH3BT56 60 aa13.12□□□□□ -0.31
EFR3A-201ENST00000254624 LINC00242Q5T6M2 205 aa13.11□□□□□ -0.31
EFR3A-201ENST00000254624 LINC00526Q96FQ7 95 aa13.1□□□□□ -0.31
EFR3A-201ENST00000254624 SLPIP03973 132 aa13.1□□□□□ -0.31
EFR3A-201ENST00000254624 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
EFR3A-201ENST00000254624 CSDC2Q9Y534 153 aaKnown RBP13.1□□□□□ -0.31
EFR3A-201ENST00000254624 LRCOL1A6NCL2 159 aa13.09□□□□□ -0.31
EFR3A-201ENST00000254624 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
EFR3A-201ENST00000254624 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
EFR3A-201ENST00000254624 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.31
EFR3A-201ENST00000254624 EGFEM1PQ0D2K5 195 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 SORL1Q92673 2214 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 Q6ZTC4 211 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 C2orf91Q6ZV80 131 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 A0A096LNI7 61 aa13.07□□□□□ -0.32
EFR3A-201ENST00000254624 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
EFR3A-201ENST00000254624 DSCAML1Q8TD84 2053 aa13.05□□□□□ -0.32
EFR3A-201ENST00000254624 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
EFR3A-201ENST00000254624 F8WDY8 70 aa13.05□□□□□ -0.32
EFR3A-201ENST00000254624 ZNF73O43830 326 aaPredicted RBP13.04□□□□□ -0.32
EFR3A-201ENST00000254624 POM121L12Q8N7R1 296 aa13.04□□□□□ -0.32
EFR3A-201ENST00000254624 URB1-AS1Q96HZ7 61 aa13.04□□□□□ -0.32
EFR3A-201ENST00000254624 SMIM1B2RUZ4 78 aa13.03□□□□□ -0.32
EFR3A-201ENST00000254624 SMIM11BQ8TCY0 68 aa13.03□□□□□ -0.32
EFR3A-201ENST00000254624 B5MCH6 92 aa13.03□□□□□ -0.32
EFR3A-201ENST00000254624 Q6ZQY7 126 aa13.02□□□□□ -0.32
EFR3A-201ENST00000254624 SS18L2Q9UHA2 77 aa13.02□□□□□ -0.32
EFR3A-201ENST00000254624 LST1O00453 97 aa13.02□□□□□ -0.33
EFR3A-201ENST00000254624 ABCA2Q9BZC7 2435 aa13.02□□□□□ -0.33
EFR3A-201ENST00000254624 NHLRC4P0CG21 123 aaPredicted RBP13.02□□□□□ -0.33
EFR3A-201ENST00000254624 AMELXQ99217 191 aa13.02□□□□□ -0.33
EFR3A-201ENST00000254624 A0A1B0GUV1 79 aa13.01□□□□□ -0.33
EFR3A-201ENST00000254624 CCKP06307 115 aa13.01□□□□□ -0.33
EFR3A-201ENST00000254624 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.01□□□□□ -0.33
EFR3A-201ENST00000254624 IGLV4-60A0A075B6I1 120 aa13□□□□□ -0.33
EFR3A-201ENST00000254624 LINC00310P59036 64 aa13□□□□□ -0.33
EFR3A-201ENST00000254624 PLAC8L1A1L4L8 177 aa13□□□□□ -0.33
EFR3A-201ENST00000254624 MYO18BQ8IUG5 2567 aa13□□□□□ -0.33
EFR3A-201ENST00000254624 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
EFR3A-201ENST00000254624 LINC00694P0DN24 101 aa12.99□□□□□ -0.33
EFR3A-201ENST00000254624 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
EFR3A-201ENST00000254624 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
EFR3A-201ENST00000254624 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
EFR3A-201ENST00000254624 LYPD5Q6UWN5 251 aa12.97□□□□□ -0.33
EFR3A-201ENST00000254624 COX6A2Q02221 97 aa12.96□□□□□ -0.33
EFR3A-201ENST00000254624 Q6ZSN1 163 aa12.96□□□□□ -0.33
EFR3A-201ENST00000254624 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
EFR3A-201ENST00000254624 FHL3Q13643 280 aa12.94□□□□□ -0.34
EFR3A-201ENST00000254624 M0QXV9 152 aa12.94□□□□□ -0.34
EFR3A-201ENST00000254624 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
EFR3A-201ENST00000254624 C2orf48Q96LS8 159 aa12.94□□□□□ -0.34
EFR3A-201ENST00000254624 SDIM1Q6ZPB5 146 aa12.94□□□□□ -0.34
EFR3A-201ENST00000254624 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
EFR3A-201ENST00000254624 RPL28P46779 137 aaKnown RBP12.92□□□□□ -0.34
EFR3A-201ENST00000254624 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
EFR3A-201ENST00000254624 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
EFR3A-201ENST00000254624 CEP295Q9C0D2 2601 aa12.91□□□□□ -0.34
EFR3A-201ENST00000254624 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
EFR3A-201ENST00000254624 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
EFR3A-201ENST00000254624 SCXQ7RTU7 201 aa12.9□□□□□ -0.34
EFR3A-201ENST00000254624 C6orf223Q8N319 242 aa12.9□□□□□ -0.34
EFR3A-201ENST00000254624 KIF25-AS1Q9Y6Z4 181 aa12.9□□□□□ -0.34
EFR3A-201ENST00000254624 IGLV5-52A0A0A0MRZ9 124 aa12.9□□□□□ -0.35
EFR3A-201ENST00000254624 C3orf84H3BNL1 204 aa12.89□□□□□ -0.35
EFR3A-201ENST00000254624 REG3GQ6UW15 175 aa12.88□□□□□ -0.35
EFR3A-201ENST00000254624 WFDC10BQ8IUB3 73 aa12.88□□□□□ -0.35
EFR3A-201ENST00000254624 NDUFC2-KCTD14E9PQ53 114 aa12.88□□□□□ -0.35
EFR3A-201ENST00000254624 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
EFR3A-201ENST00000254624 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
EFR3A-201ENST00000254624 A0A096LNJ9 63 aa12.88□□□□□ -0.35
EFR3A-201ENST00000254624 TRBV10-3A0A0K0K1G6 114 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 TSPEAR-AS2P59090 65 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 MT-ATP8P03928 68 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 C1orf134Q5TEV5 83 aa12.87□□□□□ -0.35
EFR3A-201ENST00000254624 NDUFC2O95298 119 aa12.86□□□□□ -0.35
EFR3A-201ENST00000254624 FSHBP01225 129 aa12.86□□□□□ -0.35
EFR3A-201ENST00000254624 WDR87Q6ZQQ6 2873 aa12.86□□□□□ -0.35
EFR3A-201ENST00000254624 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
EFR3A-201ENST00000254624 J3KT08 172 aa12.85□□□□□ -0.35
EFR3A-201ENST00000254624 SEC61GP60059 68 aa12.85□□□□□ -0.35
EFR3A-201ENST00000254624 PTPRBP23467 1997 aa12.85□□□□□ -0.35
EFR3A-201ENST00000254624 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
EFR3A-201ENST00000254624 Q8N814 137 aa12.83□□□□□ -0.36
EFR3A-201ENST00000254624 IMUPQ9GZP8 106 aa12.83□□□□□ -0.36
EFR3A-201ENST00000254624 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
EFR3A-201ENST00000254624 UQCRQO14949 82 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms