RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 A0A0B4J2C4 111 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 IGKV2-24A0A0C4DH68 120 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 CD164L2Q6UWJ8 174 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 TEN1Q86WV5 123 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 LINC00308Q8TCZ7 52 aa12.28□□□□□ -0.44
ACTN4-201ENST00000252699 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.44
ACTN4-201ENST00000252699 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.44
ACTN4-201ENST00000252699 FSHBP01225 129 aa12.27□□□□□ -0.45
ACTN4-201ENST00000252699 UBE2D1P51668 147 aa12.27□□□□□ -0.45
ACTN4-201ENST00000252699 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
ACTN4-201ENST00000252699 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
ACTN4-201ENST00000252699 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
ACTN4-201ENST00000252699 XAGE1AQ9HD64 81 aa12.25□□□□□ -0.45
ACTN4-201ENST00000252699 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
ACTN4-201ENST00000252699 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
ACTN4-201ENST00000252699 FLNAP21333 2647 aaKnown RBP12.24□□□□□ -0.45
ACTN4-201ENST00000252699 TRBV10-2A0A0K0K1G8 114 aa12.24□□□□□ -0.45
ACTN4-201ENST00000252699 RNF183Q96D59 192 aa12.24□□□□□ -0.45
ACTN4-201ENST00000252699 FHL2Q14192 279 aa12.23□□□□□ -0.45
ACTN4-201ENST00000252699 CFAP54Q96N23 3096 aa12.23□□□□□ -0.45
ACTN4-201ENST00000252699 A0A096LNJ9 63 aa12.23□□□□□ -0.45
ACTN4-201ENST00000252699 Q6ZSN1 163 aa12.23□□□□□ -0.45
ACTN4-201ENST00000252699 H3BT86 120 aa12.22□□□□□ -0.45
ACTN4-201ENST00000252699 TCL1BO95988 128 aa12.22□□□□□ -0.45
ACTN4-201ENST00000252699 FHL3Q13643 280 aa12.22□□□□□ -0.45
ACTN4-201ENST00000252699 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
ACTN4-201ENST00000252699 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
ACTN4-201ENST00000252699 SYCNQ0VAF6 134 aa12.21□□□□□ -0.45
ACTN4-201ENST00000252699 PTH2Q96A98 100 aa12.21□□□□□ -0.45
ACTN4-201ENST00000252699 IGLV2-18A0A075B6J9 118 aa12.21□□□□□ -0.46
ACTN4-201ENST00000252699 UBE2AP49459 152 aa12.2□□□□□ -0.46
ACTN4-201ENST00000252699 RBMY1FQ15415 496 aaKnown RBP12.2□□□□□ -0.46
ACTN4-201ENST00000252699 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
ACTN4-201ENST00000252699 ITPR3Q14573 2671 aa12.2□□□□□ -0.46
ACTN4-201ENST00000252699 Q6ZTC4 211 aa12.19□□□□□ -0.46
ACTN4-201ENST00000252699 COX7BP24311 80 aa12.19□□□□□ -0.46
ACTN4-201ENST00000252699 KIF25-AS1Q9Y6Z4 181 aa12.19□□□□□ -0.46
ACTN4-201ENST00000252699 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
ACTN4-201ENST00000252699 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
ACTN4-201ENST00000252699 TIMM17BO60830 172 aa12.18□□□□□ -0.46
ACTN4-201ENST00000252699 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
ACTN4-201ENST00000252699 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
ACTN4-201ENST00000252699 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-201ENST00000252699 ACYP1P07311 99 aa12.17□□□□□ -0.46
ACTN4-201ENST00000252699 FAM19A4Q96LR4 140 aa12.17□□□□□ -0.46
ACTN4-201ENST00000252699 IGLV4-60A0A075B6I1 120 aa12.17□□□□□ -0.46
ACTN4-201ENST00000252699 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
ACTN4-201ENST00000252699 JMJD7-PLA2G4BH0Y9G9 81 aa12.16□□□□□ -0.46
ACTN4-201ENST00000252699 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
ACTN4-201ENST00000252699 FOXI1Q12951 378 aa12.16□□□□□ -0.46
ACTN4-201ENST00000252699 POM121L12Q8N7R1 296 aa12.16□□□□□ -0.46
ACTN4-201ENST00000252699 hADV29S1A0JD25 119 aa12.15□□□□□ -0.46
ACTN4-201ENST00000252699 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
ACTN4-201ENST00000252699 H3BQ85 93 aa12.15□□□□□ -0.46
ACTN4-201ENST00000252699 A0A096LNT2 108 aa12.14□□□□□ -0.47
ACTN4-201ENST00000252699 DSPP15924 2871 aaKnown RBP12.14□□□□□ -0.47
ACTN4-201ENST00000252699 TMEM256-PLSCR3K7ERE1 68 aa12.14□□□□□ -0.47
ACTN4-201ENST00000252699 TRIAP1O43715 76 aa12.14□□□□□ -0.47
ACTN4-201ENST00000252699 ATRQ13535 2644 aa12.14□□□□□ -0.47
ACTN4-201ENST00000252699 RBM3P98179 157 aaKnown RBP12.12□□□□□ -0.47
ACTN4-201ENST00000252699 CITED1Q99966 193 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
ACTN4-201ENST00000252699 MUC4Q99102 2169 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 SMIM1B2RUZ4 78 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 AMELXQ99217 191 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 Q8IZM0 81 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
ACTN4-201ENST00000252699 TRACP01848 142 aa12.11□□□□□ -0.47
ACTN4-201ENST00000252699 M0R2N4 97 aa12.11□□□□□ -0.47
ACTN4-201ENST00000252699 LINC00315P59091 139 aa12.11□□□□□ -0.47
ACTN4-201ENST00000252699 C6orf99Q4VX62 202 aa12.11□□□□□ -0.47
ACTN4-201ENST00000252699 COX6A2Q02221 97 aa12.1□□□□□ -0.47
ACTN4-201ENST00000252699 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
ACTN4-201ENST00000252699 AKAP13Q12802 2813 aa12.1□□□□□ -0.47
ACTN4-201ENST00000252699 G3V4G9 280 aa12.1□□□□□ -0.47
ACTN4-201ENST00000252699 SZT2Q5T011 3432 aa12.1□□□□□ -0.47
ACTN4-201ENST00000252699 CYSRT1A8MQ03 144 aa12.09□□□□□ -0.47
ACTN4-201ENST00000252699 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
ACTN4-201ENST00000252699 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-201ENST00000252699 KRTAP24-1Q3LI83 254 aa12.09□□□□□ -0.47
ACTN4-201ENST00000252699 A0A087WZ39 114 aa12.08□□□□□ -0.48
ACTN4-201ENST00000252699 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
ACTN4-201ENST00000252699 C14orf132Q9NPU4 83 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 NREPQ16612 68 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 SLPIP03973 132 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
ACTN4-201ENST00000252699 A0A1B0GUV1 79 aa12.04□□□□□ -0.48
ACTN4-201ENST00000252699 FAM19A1Q7Z5A9 133 aa12.04□□□□□ -0.48
ACTN4-201ENST00000252699 COX17Q14061 63 aa12.04□□□□□ -0.48
ACTN4-201ENST00000252699 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
ACTN4-201ENST00000252699 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
ACTN4-201ENST00000252699 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
ACTN4-201ENST00000252699 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
ACTN4-201ENST00000252699 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
ACTN4-201ENST00000252699 MAST4O15021 2626 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms