RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SPANXCQ9NY87 97 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 A0A0B4J2C4 111 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 SH2D6Q7Z4S9 175 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 IGLV4-60A0A075B6I1 120 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 DEFB4AO15263 64 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 MIAQ16674 131 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 ZNF625Q96I27 306 aaPredicted RBP15.2■□□□□ 0.02
CLN6-201ENST00000249806 Q9H8V8 135 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 F5H768 121 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 H7C423 109 aa15.2■□□□□ 0.02
CLN6-201ENST00000249806 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.19■□□□□ 0.02
CLN6-201ENST00000249806 IGKV3OR2-268A0A0C4DH90 116 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 SMIM9A6NGZ8 99 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 TCL1BO95988 128 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 ETDBQ3ZM63 59 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 CHCHD5Q9BSY4 110 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 FAM222AQ5U5X8 452 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 ERG28Q9UKR5 140 aa15.19■□□□□ 0.02
CLN6-201ENST00000249806 SCGB1C2P0DMR2 95 aa15.18■□□□□ 0.02
CLN6-201ENST00000249806 GYPEP15421 78 aa15.18■□□□□ 0.02
CLN6-201ENST00000249806 F8P00451 2351 aa15.16■□□□□ 0.02
CLN6-201ENST00000249806 A0A0U1RRA0 63 aa15.16■□□□□ 0.02
CLN6-201ENST00000249806 TIMM17BO60830 172 aa15.15■□□□□ 0.02
CLN6-201ENST00000249806 SMCPP49901 116 aaPredicted RBP15.15■□□□□ 0.02
CLN6-201ENST00000249806 LYRM7Q5U5X0 104 aa15.15■□□□□ 0.02
CLN6-201ENST00000249806 ATP6V0E2Q8NHE4 81 aa15.15■□□□□ 0.02
CLN6-201ENST00000249806 FLNBO75369 2602 aaKnown RBP15.14■□□□□ 0.01
CLN6-201ENST00000249806 A0A096LPF7 62 aa15.14■□□□□ 0.01
CLN6-201ENST00000249806 Q1RN00 199 aa15.13■□□□□ 0.01
CLN6-201ENST00000249806 PRO0255Q9UI72 69 aa15.13■□□□□ 0.01
CLN6-201ENST00000249806 TRBV20-1A0A075B6N2 111 aa15.12■□□□□ 0.01
CLN6-201ENST00000249806 APOC4P55056 127 aa15.12■□□□□ 0.01
CLN6-201ENST00000249806 CIRBPQ14011 172 aaKnown RBP15.12■□□□□ 0.01
CLN6-201ENST00000249806 PRIMA1Q86XR5 153 aa15.12■□□□□ 0.01
CLN6-201ENST00000249806 IGHV4-28A0A0C4DH34 117 aa15.11■□□□□ 0.01
CLN6-201ENST00000249806 LYRM9A8MSI8 78 aa15.11■□□□□ 0.01
CLN6-201ENST00000249806 WFDC9Q8NEX5 89 aa15.11■□□□□ 0.01
CLN6-201ENST00000249806 IFITM1P13164 125 aa15.09■□□□□ 0.01
CLN6-201ENST00000249806 TMEM262E9PQX1 116 aa15.08■□□□□ 0
CLN6-201ENST00000249806 PAX4O43316 350 aa15.08■□□□□ 0
CLN6-201ENST00000249806 LINC00308Q8TCZ7 52 aa15.08■□□□□ 0
CLN6-201ENST00000249806 MEIG1Q5JSS6 88 aa15.07■□□□□ 0
CLN6-201ENST00000249806 IGHV3OR16-9A0A0B4J2B5 98 aa15.07■□□□□ 0
CLN6-201ENST00000249806 TRIAP1O43715 76 aa15.07■□□□□ 0
CLN6-201ENST00000249806 RNF183Q96D59 192 aa15.07■□□□□ 0
CLN6-201ENST00000249806 CELA1Q9UNI1 258 aa15.07■□□□□ 0
CLN6-201ENST00000249806 IGHV4-30-4P0DP06 118 aa15.06■□□□□ 0
CLN6-201ENST00000249806 TOMM7Q9P0U1 55 aa15.06■□□□□ 0
CLN6-201ENST00000249806 PCP4P48539 62 aa15.05■□□□□ 0
CLN6-201ENST00000249806 SOSTDC1Q6X4U4 206 aa15.05■□□□□ 0
CLN6-201ENST00000249806 Q8NAQ8 132 aa15.05■□□□□ 0
CLN6-201ENST00000249806 TRBV30A0A0K0K1B3 111 aa15.05■□□□□ -0
CLN6-201ENST00000249806 LINC00959A0A1B0GUT2 108 aa15.04■□□□□ -0
CLN6-201ENST00000249806 DAD1P61803 113 aa15.04■□□□□ -0
CLN6-201ENST00000249806 COX7B2Q8TF08 81 aa15.04■□□□□ -0
CLN6-201ENST00000249806 C5orf38Q86SI9 138 aa15.04■□□□□ -0
CLN6-201ENST00000249806 HERV-K104P63124 156 aa15.03■□□□□ -0
CLN6-201ENST00000249806 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
CLN6-201ENST00000249806 WIPF1O43516 503 aa15.01□□□□□ -0.01
CLN6-201ENST00000249806 RPL13AP40429 203 aaKnown RBP15.01□□□□□ -0.01
CLN6-201ENST00000249806 CLPSL2Q6UWE3 100 aa15.01□□□□□ -0.01
CLN6-201ENST00000249806 A0A1B0GUV1 79 aa15.01□□□□□ -0.01
CLN6-201ENST00000249806 MIFP14174 115 aa15.01□□□□□ -0.01
CLN6-201ENST00000249806 A0A087WZ39 114 aa15□□□□□ -0.01
CLN6-201ENST00000249806 C9JAW5 83 aa15□□□□□ -0.01
CLN6-201ENST00000249806 TRAV26-1A0A087WT03 109 aa15□□□□□ -0.01
CLN6-201ENST00000249806 OXLD1Q5BKU9 147 aa15□□□□□ -0.01
CLN6-201ENST00000249806 J3QR89 54 aa14.99□□□□□ -0.01
CLN6-201ENST00000249806 FOXI1Q12951 378 aa14.99□□□□□ -0.01
CLN6-201ENST00000249806 XCL1P47992 114 aa14.98□□□□□ -0.01
CLN6-201ENST00000249806 C21orf62-AS1Q17RA5 79 aa14.98□□□□□ -0.01
CLN6-201ENST00000249806 ATP5G1P05496 136 aa14.98□□□□□ -0.01
CLN6-201ENST00000249806 ATXN8Q156A1 80 aa14.98□□□□□ -0.01
CLN6-201ENST00000249806 SLC25A20O43772 301 aa14.97□□□□□ -0.01
CLN6-201ENST00000249806 HTN3P15516 51 aa14.97□□□□□ -0.01
CLN6-201ENST00000249806 Q8N3U1 123 aa14.97□□□□□ -0.01
CLN6-201ENST00000249806 ANK2Q01484 3957 aa14.97□□□□□ -0.01
CLN6-201ENST00000249806 FBN1P35555 2871 aaKnown RBP14.97□□□□□ -0.01
CLN6-201ENST00000249806 PKD1L1Q8TDX9 2849 aa14.97□□□□□ -0.01
CLN6-201ENST00000249806 SPART-AS1P0CW21 52 aa14.96□□□□□ -0.01
CLN6-201ENST00000249806 TEN1Q86WV5 123 aa14.96□□□□□ -0.01
CLN6-201ENST00000249806 STAB1Q9NY15 2570 aa14.96□□□□□ -0.02
CLN6-201ENST00000249806 SS18Q15532 418 aa14.95□□□□□ -0.02
CLN6-201ENST00000249806 LINC01620Q4KN68 170 aa14.95□□□□□ -0.02
CLN6-201ENST00000249806 CARD19Q96LW7 228 aa14.95□□□□□ -0.02
CLN6-201ENST00000249806 COX6CP09669 75 aa14.94□□□□□ -0.02
CLN6-201ENST00000249806 CLEC2BQ92478 149 aa14.94□□□□□ -0.02
CLN6-201ENST00000249806 MIR7-3HGQ8N6C7 128 aa14.94□□□□□ -0.02
CLN6-201ENST00000249806 ANKRD29Q8N6D5 301 aa14.94□□□□□ -0.02
CLN6-201ENST00000249806 COPS9Q8WXC6 57 aa14.94□□□□□ -0.02
CLN6-201ENST00000249806 LINC00269Q8N2A0 174 aa14.93□□□□□ -0.02
CLN6-201ENST00000249806 KRTAP10-11P60412 298 aa14.93□□□□□ -0.02
CLN6-201ENST00000249806 KRTAP24-1Q3LI83 254 aa14.93□□□□□ -0.02
CLN6-201ENST00000249806 C11orf68Q9H3H3 251 aaKnown RBP14.93□□□□□ -0.02
CLN6-201ENST00000249806 GAGE12HA6NDE8 117 aa14.91□□□□□ -0.02
CLN6-201ENST00000249806 LINC00158P58513 81 aa14.91□□□□□ -0.02
CLN6-201ENST00000249806 C6orf226Q5I0X4 101 aa14.9□□□□□ -0.02
CLN6-201ENST00000249806 PPDPFLQ8WWR9 84 aa14.9□□□□□ -0.02
CLN6-201ENST00000249806 CMYA5Q8N3K9 4069 aa14.89□□□□□ -0.03
CLN6-201ENST00000249806 ANGP03950 147 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms