RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 SETXQ7Z333 2677 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 NDUFA1O15239 70 aa9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 IFITM1P13164 125 aa9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
RAB3IP-201ENST00000247833 TRAV25A0A0B4J276 109 aa9.02□□□□□ -0.96
RAB3IP-201ENST00000247833 TIRAPP58753 221 aa9.02□□□□□ -0.96
RAB3IP-201ENST00000247833 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.96
RAB3IP-201ENST00000247833 Q8N2B8 174 aa9.02□□□□□ -0.96
RAB3IP-201ENST00000247833 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.96
RAB3IP-201ENST00000247833 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
RAB3IP-201ENST00000247833 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
RAB3IP-201ENST00000247833 SMIM1B2RUZ4 78 aa9.01□□□□□ -0.97
RAB3IP-201ENST00000247833 H7C423 109 aa9.01□□□□□ -0.97
RAB3IP-201ENST00000247833 COPS9Q8WXC6 57 aa9.01□□□□□ -0.97
RAB3IP-201ENST00000247833 LRRC75A-AS1Q8N1F1 130 aa9.01□□□□□ -0.97
RAB3IP-201ENST00000247833 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
RAB3IP-201ENST00000247833 CRPP02741 224 aa9□□□□□ -0.97
RAB3IP-201ENST00000247833 EDA2RQ9HAV5 297 aa9□□□□□ -0.97
RAB3IP-201ENST00000247833 C16orf74Q96GX8 76 aa9□□□□□ -0.97
RAB3IP-201ENST00000247833 CDC42SE2Q9NRR3 84 aa9□□□□□ -0.97
RAB3IP-201ENST00000247833 PAX4O43316 350 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 A8MTW9 85 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 DEFB4AO15263 64 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 XCL1P47992 114 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 TMEM86BQ8N661 226 aa8.99□□□□□ -0.97
RAB3IP-201ENST00000247833 DNAL4O96015 105 aa8.98□□□□□ -0.97
RAB3IP-201ENST00000247833 HTN3P15516 51 aa8.98□□□□□ -0.97
RAB3IP-201ENST00000247833 C6orf226Q5I0X4 101 aa8.98□□□□□ -0.97
RAB3IP-201ENST00000247833 RNF183Q96D59 192 aa8.98□□□□□ -0.97
RAB3IP-201ENST00000247833 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
RAB3IP-201ENST00000247833 LST1O00453 97 aa8.97□□□□□ -0.97
RAB3IP-201ENST00000247833 Q9HAA7 133 aa8.97□□□□□ -0.97
RAB3IP-201ENST00000247833 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
RAB3IP-201ENST00000247833 ATRQ13535 2644 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 SMR3AQ99954 134 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 UBR5O95071 2799 aaPredicted RBP8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 IGLV4-60A0A075B6I1 120 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 H3BT86 120 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.97
RAB3IP-201ENST00000247833 GYPEP15421 78 aa8.96□□□□□ -0.98
RAB3IP-201ENST00000247833 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
RAB3IP-201ENST00000247833 TIMM17BO60830 172 aa8.95□□□□□ -0.98
RAB3IP-201ENST00000247833 BAALC-AS2P0C853 105 aa8.95□□□□□ -0.98
RAB3IP-201ENST00000247833 IGLV10-54A0A075B6I4 117 aa8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 HERV-K104P63124 156 aa8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 KRTAP1-3Q8IUG1 177 aa8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 COX7A2LO14548 114 aa8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 RNASE1P07998 156 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-201ENST00000247833 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
RAB3IP-201ENST00000247833 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
RAB3IP-201ENST00000247833 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
RAB3IP-201ENST00000247833 TRBV6-8A0A0A6YYG3 113 aa8.93□□□□□ -0.98
RAB3IP-201ENST00000247833 LINC00482Q8N8I6 264 aa8.93□□□□□ -0.98
RAB3IP-201ENST00000247833 B5MCH6 92 aa8.92□□□□□ -0.98
RAB3IP-201ENST00000247833 ATP5G1P05496 136 aa8.92□□□□□ -0.98
RAB3IP-201ENST00000247833 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
RAB3IP-201ENST00000247833 IGLV1-51P01701 117 aa8.92□□□□□ -0.98
RAB3IP-201ENST00000247833 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
RAB3IP-201ENST00000247833 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
RAB3IP-201ENST00000247833 SS18Q15532 418 aa8.9□□□□□ -0.98
RAB3IP-201ENST00000247833 DEFB135Q30KP9 77 aa8.9□□□□□ -0.98
RAB3IP-201ENST00000247833 CSDC2Q9Y534 153 aaKnown RBP8.9□□□□□ -0.98
RAB3IP-201ENST00000247833 FHL2Q14192 279 aa8.89□□□□□ -0.99
RAB3IP-201ENST00000247833 F5H768 121 aa8.89□□□□□ -0.99
RAB3IP-201ENST00000247833 MALP21145 153 aa8.89□□□□□ -0.99
RAB3IP-201ENST00000247833 CLUHP3Q96NS8 147 aa8.89□□□□□ -0.99
RAB3IP-201ENST00000247833 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
RAB3IP-201ENST00000247833 ANGP03950 147 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-201ENST00000247833 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-201ENST00000247833 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
RAB3IP-201ENST00000247833 C3orf56Q8N813 242 aa8.88□□□□□ -0.99
RAB3IP-201ENST00000247833 FAM222AQ5U5X8 452 aa8.87□□□□□ -0.99
RAB3IP-201ENST00000247833 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
RAB3IP-201ENST00000247833 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
RAB3IP-201ENST00000247833 PLAC8L1A1L4L8 177 aa8.86□□□□□ -0.99
RAB3IP-201ENST00000247833 LECT2O14960 151 aa8.86□□□□□ -0.99
RAB3IP-201ENST00000247833 CCL18P55774 89 aa8.86□□□□□ -0.99
RAB3IP-201ENST00000247833 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
RAB3IP-201ENST00000247833 SLPIP03973 132 aa8.86□□□□□ -0.99
RAB3IP-201ENST00000247833 LINC00959A0A1B0GUT2 108 aa8.85□□□□□ -0.99
RAB3IP-201ENST00000247833 ZNF469Q96JG9 3925 aaPredicted RBP8.85□□□□□ -0.99
RAB3IP-201ENST00000247833 M0QXV9 152 aa8.85□□□□□ -0.99
RAB3IP-201ENST00000247833 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
RAB3IP-201ENST00000247833 LINC00269Q8N2A0 174 aa8.85□□□□□ -0.99
RAB3IP-201ENST00000247833 J3QKU1 62 aa8.84□□□□□ -0.99
RAB3IP-201ENST00000247833 DAD1P61803 113 aa8.84□□□□□ -0.99
RAB3IP-201ENST00000247833 FLNBO75369 2602 aaKnown RBP8.84□□□□□ -0.99
RAB3IP-201ENST00000247833 CITED1Q99966 193 aa8.84□□□□□ -0.99
RAB3IP-201ENST00000247833 PRO0255Q9UI72 69 aa8.84□□□□□ -0.99
RAB3IP-201ENST00000247833 HILS1P60008 231 aa8.83□□□□□ -1
RAB3IP-201ENST00000247833 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
RAB3IP-201ENST00000247833 C14orf132Q9NPU4 83 aa8.83□□□□□ -1
RAB3IP-201ENST00000247833 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
RAB3IP-201ENST00000247833 NBPF19A0A087WUL8 3843 aa8.83□□□□□ -1
RAB3IP-201ENST00000247833 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms