RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ETDBQ3ZM63 59 aa11.94□□□□□ -0.5
CDKN1A-201ENST00000244741 EIF4EBP3O60516 100 aaPredicted RBP11.93□□□□□ -0.5
CDKN1A-201ENST00000244741 MUSTN1Q8IVN3 82 aa11.93□□□□□ -0.5
CDKN1A-201ENST00000244741 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
CDKN1A-201ENST00000244741 IGHV1-58A0A0C4DH39 117 aa11.92□□□□□ -0.5
CDKN1A-201ENST00000244741 PSMB2P49721 201 aa11.92□□□□□ -0.5
CDKN1A-201ENST00000244741 PRO1854Q9UHT4 67 aa11.92□□□□□ -0.5
CDKN1A-201ENST00000244741 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
CDKN1A-201ENST00000244741 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
CDKN1A-201ENST00000244741 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
CDKN1A-201ENST00000244741 LITAFQ99732 161 aa11.9□□□□□ -0.5
CDKN1A-201ENST00000244741 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
CDKN1A-201ENST00000244741 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
CDKN1A-201ENST00000244741 K7EQD1 137 aa11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 TCL1BO95988 128 aa11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 DAD1P61803 113 aa11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 DGAT2L7PQ6IED9 249 aa11.88□□□□□ -0.51
CDKN1A-201ENST00000244741 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 IGHV3-33P01772 117 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
CDKN1A-201ENST00000244741 HTN3P15516 51 aa11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 LYRM7Q5U5X0 104 aa11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 COX6A2Q02221 97 aa11.86□□□□□ -0.51
CDKN1A-201ENST00000244741 TIRAPP58753 221 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 PRSS2P07478 247 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 GAGE4Q13068 117 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 GAGE5Q13069 117 aa11.85□□□□□ -0.51
CDKN1A-201ENST00000244741 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 H7C2G1 150 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 Q6ZTC4 211 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
CDKN1A-201ENST00000244741 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
CDKN1A-201ENST00000244741 J3QR89 54 aa11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 NHLRC4P0CG21 123 aaPredicted RBP11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 LINC00242Q5T6M2 205 aa11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
CDKN1A-201ENST00000244741 FHL2Q14192 279 aa11.81□□□□□ -0.52
CDKN1A-201ENST00000244741 MIAQ16674 131 aa11.81□□□□□ -0.52
CDKN1A-201ENST00000244741 F5H768 121 aa11.8□□□□□ -0.52
CDKN1A-201ENST00000244741 NPC2P61916 151 aa11.8□□□□□ -0.52
CDKN1A-201ENST00000244741 CSDC2Q9Y534 153 aaKnown RBP11.8□□□□□ -0.52
CDKN1A-201ENST00000244741 LOC100131303A0A0U1RQF7 123 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 HERVK_113P63121 156 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 ATP5G1P05496 136 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 FOXI1Q12951 378 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 ATP6V0E2Q8NHE4 81 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
CDKN1A-201ENST00000244741 IGLV5-39A0A0G2JS06 123 aa11.78□□□□□ -0.52
CDKN1A-201ENST00000244741 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
CDKN1A-201ENST00000244741 NDUFA1O15239 70 aa11.78□□□□□ -0.52
CDKN1A-201ENST00000244741 FAM19A3Q7Z5A8 133 aa11.78□□□□□ -0.52
CDKN1A-201ENST00000244741 Q1RN00 199 aa11.78□□□□□ -0.52
CDKN1A-201ENST00000244741 TIMM17BO60830 172 aa11.77□□□□□ -0.53
CDKN1A-201ENST00000244741 DAND5Q8N907 189 aa11.77□□□□□ -0.53
CDKN1A-201ENST00000244741 GTSF1LQ9H1H1 148 aa11.77□□□□□ -0.53
CDKN1A-201ENST00000244741 DNAH7Q8WXX0 4024 aa11.76□□□□□ -0.53
CDKN1A-201ENST00000244741 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
CDKN1A-201ENST00000244741 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
CDKN1A-201ENST00000244741 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
CDKN1A-201ENST00000244741 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
CDKN1A-201ENST00000244741 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
CDKN1A-201ENST00000244741 Q9H8V8 135 aa11.75□□□□□ -0.53
CDKN1A-201ENST00000244741 TEN1Q86WV5 123 aa11.75□□□□□ -0.53
CDKN1A-201ENST00000244741 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 UBE2L6O14933 153 aa11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 TRIAP1O43715 76 aa11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 SIGMAR1Q99720 223 aa11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 ZNF625Q96I27 306 aaPredicted RBP11.74□□□□□ -0.53
CDKN1A-201ENST00000244741 A0A096LPF7 62 aa11.73□□□□□ -0.53
CDKN1A-201ENST00000244741 C9JAW5 83 aa11.73□□□□□ -0.53
CDKN1A-201ENST00000244741 PAX4O43316 350 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 SLC25A20O43772 301 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 CIDEAO60543 219 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 IFITM1P13164 125 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms