RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 AMELXQ99217 191 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 TMEM238LA0A1B0GVL6 79 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 A6NJY4 79 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 LEPROTO15243 131 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 TIRAPP58753 221 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
RAB38-201ENST00000243662 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
RAB38-201ENST00000243662 TMEM223A0PJW6 202 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 GAGE4Q13068 117 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 GAGE5Q13069 117 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 PLEKHB2Q96CS7 222 aa10.67□□□□□ -0.7
RAB38-201ENST00000243662 SPANXB1Q9NS25 103 aaPredicted RBP10.67□□□□□ -0.7
RAB38-201ENST00000243662 DNAH6Q9C0G6 4158 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 J3QQQ9 107 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 COTL1Q14019 142 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
RAB38-201ENST00000243662 LGALS3P17931 250 aaKnown RBP10.65□□□□□ -0.7
RAB38-201ENST00000243662 MRPS36P82909 103 aaKnown RBP10.65□□□□□ -0.7
RAB38-201ENST00000243662 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
RAB38-201ENST00000243662 SPCS1Q9Y6A9 102 aa10.65□□□□□ -0.7
RAB38-201ENST00000243662 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
RAB38-201ENST00000243662 UBE2D3P61077 147 aa10.64□□□□□ -0.71
RAB38-201ENST00000243662 UBE2D2P62837 147 aa10.64□□□□□ -0.71
RAB38-201ENST00000243662 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
RAB38-201ENST00000243662 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB38-201ENST00000243662 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
RAB38-201ENST00000243662 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
RAB38-201ENST00000243662 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
RAB38-201ENST00000243662 Q9H8V8 135 aa10.63□□□□□ -0.71
RAB38-201ENST00000243662 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
RAB38-201ENST00000243662 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
RAB38-201ENST00000243662 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
RAB38-201ENST00000243662 Q6ZR54 194 aa10.62□□□□□ -0.71
RAB38-201ENST00000243662 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
RAB38-201ENST00000243662 K7ERJ3 54 aa10.61□□□□□ -0.71
RAB38-201ENST00000243662 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
RAB38-201ENST00000243662 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
RAB38-201ENST00000243662 TSPEAR-AS2P59090 65 aa10.61□□□□□ -0.71
RAB38-201ENST00000243662 LELP1Q5T871 98 aa10.61□□□□□ -0.71
RAB38-201ENST00000243662 UBE2D1P51668 147 aa10.6□□□□□ -0.71
RAB38-201ENST00000243662 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
RAB38-201ENST00000243662 NAA38Q9BRA0 125 aaKnown RBP10.6□□□□□ -0.71
RAB38-201ENST00000243662 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
RAB38-201ENST00000243662 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
RAB38-201ENST00000243662 M0R2N4 97 aa10.58□□□□□ -0.72
RAB38-201ENST00000243662 OCIAD2Q56VL3 154 aa10.58□□□□□ -0.72
RAB38-201ENST00000243662 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
RAB38-201ENST00000243662 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
RAB38-201ENST00000243662 IGHV3-30P01768 117 aa10.57□□□□□ -0.72
RAB38-201ENST00000243662 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
RAB38-201ENST00000243662 IGHV3-30-5P0DP03 117 aa10.57□□□□□ -0.72
RAB38-201ENST00000243662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
RAB38-201ENST00000243662 IGHV3-38A0A0C4DH36 116 aa10.56□□□□□ -0.72
RAB38-201ENST00000243662 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
RAB38-201ENST00000243662 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
RAB38-201ENST00000243662 DGAT2L7PQ6IED9 249 aa10.56□□□□□ -0.72
RAB38-201ENST00000243662 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 K7ERU9 68 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 FAM19A3Q7Z5A8 133 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 TTC32Q5I0X7 151 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 LYRM7Q5U5X0 104 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 Q6ZUT4 128 aa10.55□□□□□ -0.72
RAB38-201ENST00000243662 GEMIN7Q9H840 131 aaKnown RBP10.55□□□□□ -0.72
RAB38-201ENST00000243662 F8W1H4 67 aa10.54□□□□□ -0.72
RAB38-201ENST00000243662 H7C423 109 aa10.54□□□□□ -0.72
RAB38-201ENST00000243662 RBX1P62877 108 aa10.53□□□□□ -0.72
RAB38-201ENST00000243662 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
RAB38-201ENST00000243662 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
RAB38-201ENST00000243662 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
RAB38-201ENST00000243662 HERVK_113P63121 156 aa10.52□□□□□ -0.73
RAB38-201ENST00000243662 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
RAB38-201ENST00000243662 Q8N3U1 123 aa10.51□□□□□ -0.73
RAB38-201ENST00000243662 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
RAB38-201ENST00000243662 RTL8CO15255 209 aa10.5□□□□□ -0.73
RAB38-201ENST00000243662 TIMM17BO60830 172 aa10.5□□□□□ -0.73
RAB38-201ENST00000243662 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
RAB38-201ENST00000243662 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 CFC1P0CG37 223 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
RAB38-201ENST00000243662 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 C6orf223Q8N319 242 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
RAB38-201ENST00000243662 TSPAN13O95857 204 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms